| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Reut_A2092 |
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| Symbol | rumA |
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| ID | 3611346 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia eutropha JMP134 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007347 |
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| Strand | - |
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| Start bp | 2299733 |
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| End bp | 2301124 |
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| Gene Length | 1392 bp |
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| Protein Length | 463 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637691484 |
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| Product | 23S rRNA 5-methyluridine methyltransferase |
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| Protein accession | YP_296300 |
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| Protein GI | 73541780 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG2265] SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase |
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| TIGRFAM ID | [TIGR00479] 23S rRNA (uracil-5-)-methyltransferase RumA |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCGGCAG CGCCGCGTGC GGCATCTGCC TCTCCGGCTG CCGTCGCGCC CGGTTCCGAT
CCCGTGGTTT CCATTGACAG CCTCGACATG GAGGCGCGCG GCGTCGGGCG CCTGGTCAAT
GAAGACGGCA CTCCCGGCAA GGTCATCTTC GTCGAAGGTG CGTTGCCCGG CGAAACCGTG
AGCTACAAGA GCTTCCGCCG CAAGCCGAGC TACGAACAGG CCCATCTGCT GGAAGTGCGT
CGAGAATCGG TGATGCGTGT CAAGCCAGGT TGCAAGCACT TTGGCGTGTG CGGCGGATGC
TCCATGCAGC ACCTGGACTC GCGCGCGCAG CTTGCGATCA AGCAGCGGGT ACTCGAAGAC
AACCTCTGGC ACCTGTCGAA GGTTCGTCCG GAAGTGATGT TCCGGCCGAT CGCCGGGCCG
GACTGGGGCT ATCGCTACCG CGCACGGCTG ACGGTGCGGT ATGTGGCTAA GAAGGGTGGG
GTACTGGTGG GTTTCCACGA GCGCAAGAGC AGCTACGTGG CGGACATGAC GAGCTGCGAG
ATCCTTCCGC CACATATCTC GGCGATGCTG GTGCCGTTGC GCGAACTGGT GACGGGCTTG
TCCATTCGCG ACCGCATGCC GCAGATCGAA CTGGCGGTGG GCCATGAGGT TACGGCGCTG
GTGCTGCGCA TCCTCGAACC GCTGACCGAC GCGGACAAGG ACCTGCTGCG CGCCTTCGCG
GACCAGCACA ATGTCCAGTT CTGGCTCCAG CCCAAGGGCC CGGATACCGT TGTGCCCTTC
TATCCGCTCG ACCGTGAGCT GGCCTATACG CTGCCCGAGT TCGGCATCCG TATGCCGTTC
AAGCCGACCG ACTTCACGCA GGTCAACCAC CACATCAACA GGGTACTGAT CGGCCGCGCA
CTGCGCCTGC TGGACGTCCA GCCCCAAGAC CGCCTGCTCG ACCTGTTCTG CGGCATCGGC
AACTTCACGC TGCCACTCGC CACGCAGGGC CGCTCGGTCA TGGGCATTGA AGGCAGCGAG
GCGCTGACGA CCCGGGCGCT GGCGAATGCC GGCTACAACG GCCTGGCGGA AAAGACGGAA
TTCGCCTGCC GCAACCTGTT CGAAGTGACC GCCGAAGATA TCGCCGCGCT GGGCCGCTTC
GATCGCTGGT TGATCGACCC GCCGCGCGAA GGTGCGCTGG CGGTGTGCAA GGCGCTGGGC
GAGCTGTCGC AGCAGGGCAG CGACGTGCTG CCGCAACGCA TCGTCTATGT GTCGTGCAGC
CCGGCAACAC TGGCGCGCGA CGCGGGCCTG CTGGTGCATG AGGCCGGGTA TCGCCTGGCA
GGGGCGGGCG TCGTGAACAT GTTCCCGCAT ACGTCGCACG TCGAATCGAT TGCCGTCTTC
GAGCGGCGTT GA
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| Protein sequence | MPAAPRAASA SPAAVAPGSD PVVSIDSLDM EARGVGRLVN EDGTPGKVIF VEGALPGETV
SYKSFRRKPS YEQAHLLEVR RESVMRVKPG CKHFGVCGGC SMQHLDSRAQ LAIKQRVLED
NLWHLSKVRP EVMFRPIAGP DWGYRYRARL TVRYVAKKGG VLVGFHERKS SYVADMTSCE
ILPPHISAML VPLRELVTGL SIRDRMPQIE LAVGHEVTAL VLRILEPLTD ADKDLLRAFA
DQHNVQFWLQ PKGPDTVVPF YPLDRELAYT LPEFGIRMPF KPTDFTQVNH HINRVLIGRA
LRLLDVQPQD RLLDLFCGIG NFTLPLATQG RSVMGIEGSE ALTTRALANA GYNGLAEKTE
FACRNLFEVT AEDIAALGRF DRWLIDPPRE GALAVCKALG ELSQQGSDVL PQRIVYVSCS
PATLARDAGL LVHEAGYRLA GAGVVNMFPH TSHVESIAVF ERR
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