| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Reut_A2086 |
|---|
| Symbol | ispG |
|---|
| ID | 3611340 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia eutropha JMP134 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007347 |
|---|
| Strand | - |
|---|
| Start bp | 2293862 |
|---|
| End bp | 2295154 |
|---|
| Gene Length | 1293 bp |
|---|
| Protein Length | 430 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637691478 |
|---|
| Product | 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase |
|---|
| Protein accession | YP_296294 |
|---|
| Protein GI | 73541774 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0821] Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis |
|---|
| TIGRFAM ID | [TIGR00612] 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.276631 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACGAAC AGCTTTGTCT TCCGGTCCTG CCGGGCCCGC TGCCGCGCCG CGAAAGGCGC
CAGGCGAGCA TCGCGTGGGG CGACAACATC GTCACCATCG GTGGCAGCGC GCCGGTGCGC
GTGCAGTCGA TGACCAATAC GGATACCGTC GATGCCATTG GCACGGCCAT CCAGGTCAAG
GAACTGGCGC GCGCGGGCTC CGAGATCGTG CGCATCACGG TCAATACGCC CGAGGCAGCG
GCAGCGGTGC CGCATATCCG CGAGCAGCTC GACCGCATGG GCGTCAACGT GCCGCTGGTG
GGCGATTTCC ACTACAACGG CCACAAGCTG CTGCAGGACT ATCCGGCCTG CGCCGAGGCG
CTGTCGAAGT ACCGCATCAA CCCCGGCAAT GTGGGGCAGG GCGCCAAGCG CGACACGCAA
TTCGCGCAGA TGATCGAGAT GGCCTGCCGG TACAACAAGC CGGTGCGCAT CGGCGTCAAC
TGGGGCAGCC TGGACCAGGA CCTGCTCGCG CGCATCATGG ACGAGAACGC CGGCCGCGCG
GAGCCGTGGC CCGCGCAGAG CGTGATGATC GAAGCGTTGA TCACTTCGGC GATCGATTCG
GCAAAGAAGG CCGAGGAAAT CGGCCTGCCG GGCAACCAGA TCATCCTGTC GTGCAAGGTG
TCGCAGGTGC AGGAACTGAT TGCGGTGTAC CGCGAACTCG CGCGCCGCTG CGACTATGCG
CTGCACCTCG GCCTGACCGA GGCGGGCATG GGCAGCAAGG GCATCGTGGC GTCGACGGCG
GCGCTGTCGG TGCTGCTGCA GGAAGGCATC GGCGACACGA TCCGGATTTC GCTGACGCCG
GAACCCGGTG CGCCGCGCGA GAAGGAAGTC TATGTCGGGC AGGAAATCCT GCAGACCATG
GGCATGCGGA ATTTCACGCC GATGGTGATT GCGTGCCCCG GCTGCGGCCG CACGACGAGC
ACCACGTTCC AGGAACTGGC GGCAAGCATT CAGGCGTACC TGCGCGAGCA GATGCCGCAG
TGGAAGACCG CTTATCCGGG CGTCGAAGAG ATGGATGTGG CCGTGATGGG CTGCATCGTC
AACGGCCCTG GCGAAAGCAA GCATGCCAAC ATCGGCATTT CGCTGCCGGG TTCGGGCGAA
TCGCCGGCGG CGCCGGTGTT TGTCGATGGC GTCAAGGTCA AGACGCTGCG CGGCGAGCGC
ATCGCCGAGG AATTCCAGGC GATCGTCGAC GAGTACGTTC GCACGCATTA CGGTCCGGGC
GCAGCGCGGG CAGAGAAGGA AGCGGTGGCC TGA
|
|---|
| Protein sequence | MNEQLCLPVL PGPLPRRERR QASIAWGDNI VTIGGSAPVR VQSMTNTDTV DAIGTAIQVK
ELARAGSEIV RITVNTPEAA AAVPHIREQL DRMGVNVPLV GDFHYNGHKL LQDYPACAEA
LSKYRINPGN VGQGAKRDTQ FAQMIEMACR YNKPVRIGVN WGSLDQDLLA RIMDENAGRA
EPWPAQSVMI EALITSAIDS AKKAEEIGLP GNQIILSCKV SQVQELIAVY RELARRCDYA
LHLGLTEAGM GSKGIVASTA ALSVLLQEGI GDTIRISLTP EPGAPREKEV YVGQEILQTM
GMRNFTPMVI ACPGCGRTTS TTFQELAASI QAYLREQMPQ WKTAYPGVEE MDVAVMGCIV
NGPGESKHAN IGISLPGSGE SPAAPVFVDG VKVKTLRGER IAEEFQAIVD EYVRTHYGPG
AARAEKEAVA
|
|---|
| |