| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Reut_A2024 |
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| Symbol | |
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| ID | 3611671 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia eutropha JMP134 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007347 |
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| Strand | + |
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| Start bp | 2219675 |
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| End bp | 2220964 |
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| Gene Length | 1290 bp |
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| Protein Length | 429 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637691415 |
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| Product | secretion protein HlyD |
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| Protein accession | YP_296232 |
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| Protein GI | 73541712 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | [TIGR00998] efflux pump membrane protein (multidrug resistance protein A) |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0436308 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGATA ACCAGCAAGC CGGCAACCCG AACACTCCGG CGGCATCCGT CAACAACAAT
GGCAAGCGCA AGCGCCTGTT GCTTTCCCTG ACCGCGGCCA TCGTCGTGGC AGGCGTCGGC
TACGGCGTGT ACTGGGGCCT GTACGCGCGC CACTTCGAAA GTACCGATGA CGCGTACGTC
GCCGGCAACG TGGTCCAGGT CACGCCGCTG GTAGGCGGCA CCGTGGTGTC GATCGCCGCG
GATGACACGC AGCTCGTCAC CGCAGGCCAG CCGCTGATCC AGCTCGACCG CGCCGATACG
CAAGTCTCGC TGGAACAGGC CGAGGCCATG CTGGCGCAGG CCGTGCGCGA AGTCCGCACG
CTCTACGTCA ACAACGGCTC GCTCGCCGCG AACGTGGCGC TGCGCGAGGC CGACGTCGCC
AAGGCGCGCG ACGACCTGCG CCGCCGCCAG GCGATCGCCG GCTCGGGTGC GGTGTCGGGC
GAAGAAATCT CCCACGCACA GACCGCGCTG CAGGGGGCGC AATCGGCTCT GCTTGCCGCA
CGCGAGCAGC TCGCCTCGAA CAAGGTGCTG ACCGACCAGA CCACCGTCGA AAAGCATCCG
AACGTGCAGC GCGCGGCAGC CAACCTGCGC TCGGCCTATC TGTCGTTCGC GCGTTCCGCT
CTGCCCGCGC CGGTCACGGG CTACGTCGCC AAGCGCTCGG TCCAGGTCGG CCAGCGTGTG
GCCGCCGGGG CACCGCTGAT GGCCATCGTG CCGCTGGACC AGGTCTGGGT CGACGCGAAC
TTCAAGGAAG TGCAGATCAC GCATATGCGC ATCGGCCAGC CCGTGACGCT GGAAGCCGAC
GTCTATGGTT CGAAGGTCAA GTACAACGGC AAGGTCGCGG GCTTCTCTGC CGGTACCGGC
TCCGCGTTCT CGCTGCTGCC CGCACAGAAC GCCACCGGCA ACTGGATCAA GGTGGTGCAG
CGCCTGCCCG TGCGTATCGC GCTTGACCCG CAGCAGCTCA AGGATCACCC GCTGCGCGTC
GGCCTGTCGA TGAACGTGAC CGTCGACGTG CGCCACGAAG AAGGCGCCGC CATGGTCAGC
GCCGCCGCGG CCAAGCCGAT GCAGACGGAC GTCTACGACA AGGTCGCGCA AGACGCCGAC
CAGCTGATCG CGCGCATCAT CGCCGTGAAC AATGGCGGCC GCGCGCCAGC TCCCGCAGAT
GCCGTACCTG CCAAGGGCGC ACCGGTCATC AATGTTCCGG CCGATGACGC GGCCAGCGCC
GCTGTGGCGC GGCCTTCCAA CCGCGGCTGA
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| Protein sequence | MSDNQQAGNP NTPAASVNNN GKRKRLLLSL TAAIVVAGVG YGVYWGLYAR HFESTDDAYV
AGNVVQVTPL VGGTVVSIAA DDTQLVTAGQ PLIQLDRADT QVSLEQAEAM LAQAVREVRT
LYVNNGSLAA NVALREADVA KARDDLRRRQ AIAGSGAVSG EEISHAQTAL QGAQSALLAA
REQLASNKVL TDQTTVEKHP NVQRAAANLR SAYLSFARSA LPAPVTGYVA KRSVQVGQRV
AAGAPLMAIV PLDQVWVDAN FKEVQITHMR IGQPVTLEAD VYGSKVKYNG KVAGFSAGTG
SAFSLLPAQN ATGNWIKVVQ RLPVRIALDP QQLKDHPLRV GLSMNVTVDV RHEEGAAMVS
AAAAKPMQTD VYDKVAQDAD QLIARIIAVN NGGRAPAPAD AVPAKGAPVI NVPADDAASA
AVARPSNRG
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