Gene Reut_A1952 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagReut_A1952 
Symbol 
ID3611129 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia eutropha JMP134 
KingdomBacteria 
Replicon accessionNC_007347 
Strand
Start bp2138821 
End bp2139522 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content65% 
IMG OID637691342 
ProductHAD family hydrolase 
Protein accessionYP_296160 
Protein GI73541640 
COG category[R] General function prediction only 
COG ID[COG1011] Predicted hydrolase (HAD superfamily) 
TIGRFAM ID[TIGR01428] 2-haloalkanoic acid dehalogenase, type II
[TIGR01493] Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.478316 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCAAGA TCCGCGCAGT CGTCTTCGAC GCCTACGGCA CGCTGTTCGA CGTGTATTCC 
GTCACGGCGC GCGCGGAACA GTTGTTCCCG GGCAAGGGTG AGGCACTGGC ATTGCTGTGG
CGCGAGCGCC AGATCGACTA CACCCGCGTT CGCAGCATGG CCTCGCCCGA CGGCAAGTAC
TACAAGCCGT TCTGGGCCCT GACGGTGGAT TCGCTGCGCT ACGCCGCAGA GCGGCTGCGC
GTGACGCTGG ACGAGGCGAC CGAGGCGCAA TTGCTTAAGG AATACGCCTG CCTGTCCGCG
TTCCCGGAGA ACCTGGGTGC GCTCAAGCGA CTGCGACGCG CGGGCCTGCC GCTCGGCATC
CTGTCCAACG GCAATGCCGA GATGCTGGAC ATTTCGGTCA AGAGTGCCGG CATGCACGGG
CTGTTTGACC ACGTGCTGTC CGTGGATGCC GTGCGCCAGT ACAAGACGGC ACCGGCGGCC
TATGCGCTCG GGCCGAAGGC ATTCGACCTG CCGGCAGAAG ACATCCTCTT TGTCTCGTCG
AATGGGTGGG ATGCCTGCGG CGCGACCTGG TTTGGCTACA CCACGTTCTG GATCAACCGT
GCCGGCCACC CGGCGGAGCG CCTTGACGTA GCGCCCTCCG GCACCGGGCA CGATATGAAC
GACCTGCTCG ATTTCGTCCG CGCCAAAGGC GTGGAAATCT GA
 
Protein sequence
MTKIRAVVFD AYGTLFDVYS VTARAEQLFP GKGEALALLW RERQIDYTRV RSMASPDGKY 
YKPFWALTVD SLRYAAERLR VTLDEATEAQ LLKEYACLSA FPENLGALKR LRRAGLPLGI
LSNGNAEMLD ISVKSAGMHG LFDHVLSVDA VRQYKTAPAA YALGPKAFDL PAEDILFVSS
NGWDACGATW FGYTTFWINR AGHPAERLDV APSGTGHDMN DLLDFVRAKG VEI