Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Reut_A1818 |
Symbol | |
ID | 3609860 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia eutropha JMP134 |
Kingdom | Bacteria |
Replicon accession | NC_007347 |
Strand | + |
Start bp | 1990587 |
End bp | 1992098 |
Gene Length | 1512 bp |
Protein Length | 503 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 637691208 |
Product | RND efflux system, outer membrane lipoprotein, NodT |
Protein accession | YP_296027 |
Protein GI | 73541507 |
COG category | [M] Cell wall/membrane/envelope biogenesis [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1538] Outer membrane protein |
TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.570974 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCTCAACA CGTCCGCGAC GGAACACCGC AAAAAGCAGC CTGCCAGGCA TGGAACACTC AGACACCAGG CCGGGCGGGC ACTGGCAACG GGGCTCGTGG TCCTGCTTGC CGGATGCGCA GCCGCCCCGC CCTATCGGCC ACCCCCCATA GACCTGCCAG ACGCCTACAA GGAGGCCGGC GCCAGCCCGG CCAGGCCCGG TGGCCCCGAC GCGATCGCGC CTGACTGGTG GCGCGCCTAT GGCGACGCGA CCCTGGACCG CCTGGAAGCG CGCGTCGAGG TCTCGAGCGA GACCCTGCGC AAGGCCGTGG CGCAACTGCA GGATGCGCAG GCCCAGGCGC GGGCCGCCAG GTCGGCCTAC TTTCCTACCG TGACAGCCGG CGCGGCATTC AGCAGGAGTC GTGTCTCTGA CAATGTCGTC GGGCGATCGC TGGCGGGCAA GACCACCAAT GACTACCTGC TTGGCGTGGG CGCCTCCTGG GAGCCGGACC TGTTTGGCCG TATCGGCAGC ACCGTGGATG CGGCCGAGGC GCGCGCACAG GCCAGCGCGG AAGACGTGGC GGCCGTGCGT CTGGGCCTGC AGGCGGAGCT GGCCGACGAC TACTTCGGCG TGCGCTCGCT CGATCGAGAG GCAGCACTGC TGCAGCAGAC CATCGAGGCA TACACATCCG TGGTTGAGCT GGTAACGAAC CGATACCGCG GCGGCATCGC CACGGAGGGC GACGTCGCCC AGGCCCGCGC CCAGCTGGAA AGCACCCGCG CCCAGCTGTC GGACCTGCGC CTGAACCGGA CGCAGCTCGA ACACGCCCTT GCCACGCTGG TGGGCGAACC GGCAAGCCGG TTTTCGCTTG CGCCGGCTGA TGGGACAGCC CATCCGGAAC AGCTGCCGCC ATTCCCGGCC GCCTTGCCCT CGCAACTGCT CGAACGCCGG CCGGATGTCG CCGCGGCCGA GCGCAGGGTG GCGGCCGCGA ATGCGCAGAT CGGGGTCGCG CGGGCCGCCT TCTTCCCCAG CCTGATGCTG ACGCTGGGCG GCGGCCTGGA AAGCTCAAGC CTGGCAAGCT GGCTGACCGC ACCAAGCCGC TTCTGGGCCA TCGGGCCGGC ATTGGCCGGC ACGCTGCTGG ACGGCGGGCG CCGCCGCGCC GGTGAAGACA GCGCCCGCGC GCAGTTTGAC GCCAGCGCCG CGGACTACCG GTCCACGGTG CTACGTGCAG TACAGGAAGT CGAAGACGGC TACGCCGCCA TCCAGGCCTT GCAGGACGAA GCGCGAAGCC AGCGGATTGC GACGCAGTCC TCTGGCCGGG CCCTGTCTAT CGGGCTGGAC CGCTACCGGA AAGGCGCGGT GGCCTACCTC GACGTCAATA TCCTGCAGGC GGCCTCACTT TCCAGCGACC GCGCGCTCGA GAGTGTGCGC CGGCGTCAGT TGACGGCGAG CGTGGGGCTC ATCAAGGCGC TCGGAGGTGG CTGGGAAGGC ACGGGGCCAG TGGCGCGGTC AGTGCCACTA CCGCATGAGT AA
|
Protein sequence | MLNTSATEHR KKQPARHGTL RHQAGRALAT GLVVLLAGCA AAPPYRPPPI DLPDAYKEAG ASPARPGGPD AIAPDWWRAY GDATLDRLEA RVEVSSETLR KAVAQLQDAQ AQARAARSAY FPTVTAGAAF SRSRVSDNVV GRSLAGKTTN DYLLGVGASW EPDLFGRIGS TVDAAEARAQ ASAEDVAAVR LGLQAELADD YFGVRSLDRE AALLQQTIEA YTSVVELVTN RYRGGIATEG DVAQARAQLE STRAQLSDLR LNRTQLEHAL ATLVGEPASR FSLAPADGTA HPEQLPPFPA ALPSQLLERR PDVAAAERRV AAANAQIGVA RAAFFPSLML TLGGGLESSS LASWLTAPSR FWAIGPALAG TLLDGGRRRA GEDSARAQFD ASAADYRSTV LRAVQEVEDG YAAIQALQDE ARSQRIATQS SGRALSIGLD RYRKGAVAYL DVNILQAASL SSDRALESVR RRQLTASVGL IKALGGGWEG TGPVARSVPL PHE
|
| |