Gene Reut_A1808 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagReut_A1808 
SymbolprpB 
ID3609908 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia eutropha JMP134 
KingdomBacteria 
Replicon accessionNC_007347 
Strand
Start bp1975879 
End bp1976787 
Gene Length909 bp 
Protein Length302 aa 
Translation table11 
GC content66% 
IMG OID637691198 
Product2-methylisocitrate lyase 
Protein accessionYP_296017 
Protein GI73541497 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2513] PEP phosphonomutase and related enzymes 
TIGRFAM ID[TIGR02317] methylisocitrate lyase 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.988873 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCTATT CCGCATCCGA CCTGGCCCGC TCCGCTGGCG CCCGCTTCCG CCAGGCCCTG 
GCCGAAGAGC ACCCGCTGCA GGTGGTGGGC ACCATCAACG CCAACCACGC CCTGCTGGCC
AAGCGCGCCG GCTACCGTGC GATCTACCTG TCGGGCGGCG GCGTGGCCGC GGGCTCGCTG
GGCCTGCCTG ACCTGGGCAT CTCGGGCCTG GAAGACGTGC TGATCGACGT GCGCCGCATC
AGCGATGTAT GCGATGTGCC GCTGCTGGTC GACGTCGACA CCGGCTTTGG TTCGTCGGCC
TTCAACGTGG CACGCACCAC CCGCTCGCTG ATCAAGGCCG GCGCCGGTGC CATGCACATC
GAAGACCAGG TCGGCGCGAA GCGCTGCGGC CACCGCCCGA ACAAGGAAAT CGTCACGCAG
ACCGAGATGG TCGACCGCAT CAAGGCCGCC GTTGACGCCC GTACCGACGA GAACTTCGTG
ATTATGGCGC GTACCGACGC GCTGGCCGTG GAAGGCCTGG AAAGCGCCAT CGAGCGCGCC
GTGGCGTGCG TCGAGGCTGG CGCCGACGCG ATCTTCCCGG AAGCCATGAC CGACCTGGCC
ATGTACCGCA AGTTCGTGGA CGCCGTGAAG GTGCCCGTGC TGGCCAACAT CACCGAATTT
GGCGCCACGC CGCTGTTCAC CACCGACGAA CTGGCCGGCT CCGGCGTGTC GATGGTGCTG
TACCCGCTGT CGGCCTTCCG CGCGATGAAC AAGGCCGCCG AGAACGTCTA CACCGCCATC
CGCCGCGACG GCACCCAGAA GAATGTGGTC GAGACCATGC AGACCCGTGC TGAACTGTAC
GAAAGCATCG GCTACCACGC CTACGAACAG AAACTCGACG CCCTGTTTGC ACAGGGCAAG
GCCAAGTAA
 
Protein sequence
MTYSASDLAR SAGARFRQAL AEEHPLQVVG TINANHALLA KRAGYRAIYL SGGGVAAGSL 
GLPDLGISGL EDVLIDVRRI SDVCDVPLLV DVDTGFGSSA FNVARTTRSL IKAGAGAMHI
EDQVGAKRCG HRPNKEIVTQ TEMVDRIKAA VDARTDENFV IMARTDALAV EGLESAIERA
VACVEAGADA IFPEAMTDLA MYRKFVDAVK VPVLANITEF GATPLFTTDE LAGSGVSMVL
YPLSAFRAMN KAAENVYTAI RRDGTQKNVV ETMQTRAELY ESIGYHAYEQ KLDALFAQGK
AK