| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Reut_A1787 |
|---|
| Symbol | |
|---|
| ID | 3610140 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia eutropha JMP134 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007347 |
|---|
| Strand | + |
|---|
| Start bp | 1950424 |
|---|
| End bp | 1952865 |
|---|
| Gene Length | 2442 bp |
|---|
| Protein Length | 813 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 637691177 |
|---|
| Product | TonB-dependent receptor |
|---|
| Protein accession | YP_295996 |
|---|
| Protein GI | 73541476 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCAGCCA ACCCGTTCCC TGCCCCGCTA TCGCAGGCCA ACCGTCACGC CGCGGCGCAC
CGGGGCAGGC GCTGTAGCCG TGCCACCACG ATCATCGCCA TGGCCGCTGC GGTGCTGGCG
CAGCGGCCGG CTGTTGCACA ACAGGACACC GTTGCTCCAA AGCAGGACAG CGCGGTGCTG
CCCGAAGTCC TGGTGGTAGC CACCGCGCCG CTTCCGGGCA TCGGCGTGGA CAGCGACCTG
GTGCCCTACA CCGTGCAGAC CGTGCGCGGC GAACAACTCG ATGGCACGCG CGCGAGCAAC
CTGACCGACT ACCTGGCCCG CAACCTGGCC GGCGTCAACG TCAACGATAT CCAGGGCAGC
CCGTTCCAGA GCGACATCAC GTACCGTGGC TACCGCGCTT CGTCTATGCC GGGCATGCCG
CAAGGCCTCT CGGTCTACCT GGACGGCGTG CGCGTCAACG AACCGTTCGG CGATGTGATC
AGCTGGGACA TGATTCCCGA GGCCGCGCTG TCAAGCGTCT CGCTGGTCTC CAGCGCCAAC
CCGGCCTACG GCCTGAACAG CCTCGGCGGT GCGCTGGCAA TGACCACGCG GTCCGGCCTG
GACTCGCCGG GCTTCACCGC CGACCTCTCG TATGGCAGCG GCAACCGCAA GCGCGCCGAC
CTCTCAGGCG GCGTGCGCAG CGACAGCGGT TGGCACGCTT TCGCCGCCGG CACGCTGTTC
CAGGAACATG GATGGCGCGA CAACTCGTCG GGACGGCTCG GCAACGTCTT TGCCAAGGCT
GGCTATGCGG GGGAGACCAA CAGCGTGGAT GTGTCGCTGC TGCACGGCAG CAGCACGTTG
ACCGGCAACG GGCTGGTACC GGCCTTCCAT GCCAGCGGCA ATGGGACGGA GGCCGACCTC
TACCAGACGA ACCGCCGCGC GGTTTACACC TATCCGGACC AGACCCGCAA CCAGGTCACA
CAGGTCGCGG TCAACAGCCG CCACTGGTTC GACGACAAGA CCAGCGCCGC CGCCCTGGCC
TATGTGCGCA CCAGCCGGCG CGACACCGCC AACGGCGACG TCAACCCTGA CTACGAAACC
TATATCGAAG CCTGCGAGGA TGGCTTCAAC GCCGACGGCA GCCCACGCGG TGATGGCTGC
GGCGTGACCC GGGCCGAAGG TGCGGCGTTG CGCCCCGCCA TCATCAACAC CACGCATATG
CGGCAGCAGA CCGTCGGCGT TGCGTTGAGC CTGGCCAAGG AGACCGAGCA CCACGTGCTG
AACGCCGGCA CGACGCTGGA CCGCAGCCGC CTGACCTATT CCCAATACGC CCAGCCTGGC
ACCTTTACCG ACGACCGCGG CGCCGTGGCC GATCCCGATG CGCCCAATGC GCTGGTCTCC
GGCGTCAGCG GCAATGCGCG CACATTCGGC GTGTACCTGT CCGACACCTG GTCGGTGACG
CCAAGCACCT TCCTGACGGC ATCGGCGCGA TGGAACCTTG CCACGGTGAG CAATACCCTG
CAAAACAGCG ACGGCACCGA GCAGCCGCGC GAGAGCTTTA CCTACCGCCA CCTCAACCCC
GCGCTCGGGC TGGTGCAGAA GCTGGGCGCT GGCGTCACGG TGTTCGGCGG CTACGCCCAG
AACAACCGCG TGCCTACGGT TCTCGAACTC GGCTGCGCCG ACCCCGCGCA GCCGTGCCGT
CTGCCGGCCG GGCTGCAGGC CGACCCCTAT CTCAAGCAGG TGGTCTCGCA CGCCTTCGAA
ACCGGCGTGC GCTGGCGCCG CGGCAAGGAC ACCGAAGTCA CCGCGACGCT CTATCGCATC
GACAACCACG ACGACATCCT GTTCCTGCGC GCGCCCAACA CCCAGTTCGG CTATTTCGCC
AACTTCGACC GTACCCGCAA CCAGGGCCTC GACCTCACCG CGCACCATCG GGTCGGCGAT
GTCACGCTGC GCCTTGGCTA CAGCTATCTG CAGGCGACCT ACCAGGCGAA CGGACAGCTG
GCGGCAGGCG AGCGCACCAT CGACGTTCAC CCCGGCATGC GCATGGCCGG CGTGCCGCGC
CACACGTTCA AGTTCGGCAT AGACTGGCAG GCGCTGGCGG GCCTCACGCT GGGTGCCGAT
GTGGTGGCCG TATCCAGCAG CGTCGCCAGC GGCAATGAAG ACGGACTGCG CAGCGATCCG
CAGCCGGGTC AACCGCCCAA GACGGCGGAC TGGCATGTGC CCGGCTACGC CACCGTCAAC
CTGCGGGCGG CGTACCAGGT GAGCAAACGG TTCGAGGTCT ATGCGCGCGT GGCCAATCTG
TTCGACCGGC GCTACGAGAC CTACGGCCAA CTGGCTAACA ACGTGTTTCC TGGCGGTAAC
CTCGTGCAGC CGCATGTCGC GCCGGGAGAT AGCGCGACGT CGTTGTTCGT GGCCCCGGGA
GCGCCGCGCA GCGTCTGGCT GGGCGTGGTG TACAAGATGT AG
|
|---|
| Protein sequence | MPANPFPAPL SQANRHAAAH RGRRCSRATT IIAMAAAVLA QRPAVAQQDT VAPKQDSAVL
PEVLVVATAP LPGIGVDSDL VPYTVQTVRG EQLDGTRASN LTDYLARNLA GVNVNDIQGS
PFQSDITYRG YRASSMPGMP QGLSVYLDGV RVNEPFGDVI SWDMIPEAAL SSVSLVSSAN
PAYGLNSLGG ALAMTTRSGL DSPGFTADLS YGSGNRKRAD LSGGVRSDSG WHAFAAGTLF
QEHGWRDNSS GRLGNVFAKA GYAGETNSVD VSLLHGSSTL TGNGLVPAFH ASGNGTEADL
YQTNRRAVYT YPDQTRNQVT QVAVNSRHWF DDKTSAAALA YVRTSRRDTA NGDVNPDYET
YIEACEDGFN ADGSPRGDGC GVTRAEGAAL RPAIINTTHM RQQTVGVALS LAKETEHHVL
NAGTTLDRSR LTYSQYAQPG TFTDDRGAVA DPDAPNALVS GVSGNARTFG VYLSDTWSVT
PSTFLTASAR WNLATVSNTL QNSDGTEQPR ESFTYRHLNP ALGLVQKLGA GVTVFGGYAQ
NNRVPTVLEL GCADPAQPCR LPAGLQADPY LKQVVSHAFE TGVRWRRGKD TEVTATLYRI
DNHDDILFLR APNTQFGYFA NFDRTRNQGL DLTAHHRVGD VTLRLGYSYL QATYQANGQL
AAGERTIDVH PGMRMAGVPR HTFKFGIDWQ ALAGLTLGAD VVAVSSSVAS GNEDGLRSDP
QPGQPPKTAD WHVPGYATVN LRAAYQVSKR FEVYARVANL FDRRYETYGQ LANNVFPGGN
LVQPHVAPGD SATSLFVAPG APRSVWLGVV YKM
|
|---|
| |