| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Reut_A1668 |
|---|
| Symbol | |
|---|
| ID | 3610208 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia eutropha JMP134 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007347 |
|---|
| Strand | - |
|---|
| Start bp | 1800164 |
|---|
| End bp | 1800931 |
|---|
| Gene Length | 768 bp |
|---|
| Protein Length | 255 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 637691056 |
|---|
| Product | NAD-dependent epimerase/dehydratase:Short-chain dehydrogenase/reductase SDR |
|---|
| Protein accession | YP_295878 |
|---|
| Protein GI | 73541358 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
|---|
| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.554657 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAACTGA CCGCAGATAT GTCCGCTGTT GTGACCGGCG GCGCGTCCGG CCTGGGCCTG
GCTACCGCAC GCCGCCTGAT CGAGCGCGGT GTCAGCGTGG TGATCGCCGA CCTCTCCGAA
GAACGCGGCA ACGCCGCCCT GGACGAACTC GGTCCCAAGG CGCGCTTCGT CAAGGCCGAT
GTCTGCGACA CCGACCAGAT GAACGCCGTC TACGACGCGG CCGAAGCGCT CGCCCCGCTG
CGCGCGCTGG TGCACTGCGC CGGTCTTGGT GCCGCGGTGC GCGTGGTCGA GAAGGACGGC
TCGCCGGGTT CGCTGGAAAA GTACGAGTCG ATCGTGCGCA TCAACCTGAT CGGCACGTTC
AATGCGCTGC GCCTGGGTGC CGCGCGCATG GCGAAGAACG AAATGATCGA CGGCGAGCGT
GGTGCCTGCG TGCTGACCGC TTCGGTCGCC GCCTACGAAG GCCAGATCGG CCAGATTCCG
TATTCGTCGG CCAAGGCCGG CATCGTCGGC ATGACGCTGG TGGCCGCGCG TGACCTGGCG
CAGCGTGCGA TCCGTGTCTG CACGATTGCT CCGGGCCTGT TCGACACGCC GCTGCTGGCC
AAGCTGCCGG AAAACGTGCG CGCCTCGCTG GGCGCGATGG TGCCGCACCC GGCACGCCTG
GGCGCGCCGG ACGAGTACGC ATCGACTGCC CTGCACATCC TCGAAAACAT CATGCTCAAC
GGCGAAACCA TTCGGCTGGA TGGCGCTATT CGCATGGCCC CGCGCTGA
|
|---|
| Protein sequence | MKLTADMSAV VTGGASGLGL ATARRLIERG VSVVIADLSE ERGNAALDEL GPKARFVKAD
VCDTDQMNAV YDAAEALAPL RALVHCAGLG AAVRVVEKDG SPGSLEKYES IVRINLIGTF
NALRLGAARM AKNEMIDGER GACVLTASVA AYEGQIGQIP YSSAKAGIVG MTLVAARDLA
QRAIRVCTIA PGLFDTPLLA KLPENVRASL GAMVPHPARL GAPDEYASTA LHILENIMLN
GETIRLDGAI RMAPR
|
|---|
| |