| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Reut_A1640 |
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| Symbol | |
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| ID | 3610065 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia eutropha JMP134 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007347 |
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| Strand | + |
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| Start bp | 1765622 |
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| End bp | 1768261 |
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| Gene Length | 2640 bp |
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| Protein Length | 879 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637691028 |
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| Product | diguanylate cyclase/phosphodiesterase |
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| Protein accession | YP_295850 |
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| Protein GI | 73541330 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGAGAAC GCTCGACCAC CCGGGGCAAG GCGCTGCAGC GCCTGCGCCA GGTCTTTTCC
CCCTTGAACC TGGGCGCGGC GGCGTGGCTG ATTGCAACGT GGTCATTCGC GGCGTTTCAA
CTCGTGAGCG AGCGGGACCG GTTGCTGCAC GACGCTGCCG ACCGTACCCA GGCAGAGGCT
CTGGCGTTCG GCGCGTACTC CAAGTCCAGC ATCCTGCGGC TGTCCGAGTT CCTCCTTGAC
CTGCGGGCCA GTTGGCTGGC CGGTCAGACG GGCTTCATCG ACATGGTGCG TGAGCGGGAG
AACCTGGTGG TCGATCTCAC GTTCCAGGTC GCCGTGATCG ACAAGCATGG CTTGCTCGTC
TACTCATCTA TCGCCCCGCC CGCATCCGGC GAGAAGGTTG ACCTGAGCGG GCGCGAGCAT
TTCCGGGTCC ATCAGGACGC GGGCGGCCGC GACATGCTGT TTATCAGCGA CCCGGTGAAG
GGCAAGGTCT CGGGCAAATG GTCGATCCAG TTCACGCGCC CGATCCTGCG CGAGGGCAGC
TTCGACGGGG TCATCGTGGT CTCGGTCAGT CCGGAGCAGT TCGCCAGCTT TGCGCAGACG
TTCACTAACC GCGATGGCGA AGTGGCGTCG GTCATCAAGA GTTCGGGCCA GGTCATTGCG
CGCGTACCGA GCCTGGAGGG CTCACTGGCA AGGGCGGTCA CCAACAGGCC CTATCTCGCC
AGCGGGTCGC CCCAGTCTGG TAGTTATCGC GCGGTATCGG GCTCCGAAGG CGTGGAGCGG
GTCTTTGGCT ATTACCGCAT GCCGGAGTTC GGACTCAATT TCGTAGTGGG CGAGTCGGTG
GGCCTGGTGC TGGCTCCCTA CGAGGTCTAT CGCCGCATTG CGTTGGCCGG CGCCATGGCT
TCCACGCTGC TGGTCGGACT GTTGTACTAC AGCCTGCGTC GCTCCATGGT GGAGCGACGG
CGCCATCTGG AGGAGATGCG GCTGGCGGCG CTGGTTTATT CGTCGAGCAG CGAGGCCATG
ATGGTGACCT CCGTCGACGG CACCATCATC GACGCGAATC CCGCCTTTGC GGCTGCCACC
GGCTATACGG TCGAGGAGAT CAAGGGCCGC TCTGGCTACG GCATTAGCGG AGCCGGCAAT
GCGGCAGGGC TGGTCGAACG CCTGCGGGCT ACCTTGGGCG CCAAGGGCAG ATGGAGCGGC
GAATTCTCGA TCCGCCGCAA GGACGGCAGC GAGTTTCCCG CCTACCTGAC CGTTGATACC
TACCTGGCAC ACCAGTACGG CGAGCACCGC CGCGTCGCGC TGATCCATGA CATGACCGAA
AAGCGCCAGG CGGAAGAAGT TATCCGGCAC CAGGCGAATT TCGACGCGCT CACGGACCTG
CCCAACCGCC GCCTGTTCTT CGAGCGGCTG GAGCAGGAAA TCGAGCGTTC GCGCGGCACG
CAGGATGTGC TGGCGCTGCT GTTCATCGAC CTGGATCGGT TCAAGGAGGT GAACGATACC
CTTGGCCACG ACCAGGGCGA CCTGTTGCTG CTGGAGGCGG CGCGGCGCAT CGCGGCATCG
GTGCGCGCGT CGGATACCGT CGCGCGGCTT GCCGGGGACG AGTTCACCGT GATCCTGCCC
GCAGTCGGCG ATGCCGGCGT TGCCGGCGGC ATCGCCGAGG CGATCCTGCA GCAGATTGCC
GCGCCTTACC GCCTGGCCGG CGAGCTGGTG GTGGTGTCGG CCAGCATCGG CGTGGCGACC
TACCCCAAGG ACGCCGACAA TGCCGAGGCG CTGCTGGTGT ACGCCGACCA CGCGATGTTT
GCCGCCAAGG AGGAGGGGCG CAATCGCTGG AAGATCTTCA CCCAGGCGCT GCTGCAGGCA
GAGAGGGAAC GCCTGCGTAT CACGCAGGAC CTGCGCACGG CGCTGGCGTC CGAACAATTC
GCGCTGCACT ACCAGCCCAT CGTTGATCTG CGCACCGGCA AGGTCTGCAA GGCCGAGGCC
CTGATTCGCT GGAACCATCC GGTGCGCGGG CCGATCCACC CGGTCGATTT CATTGCCGTT
GCGGAGGAAT CCGGCCTCAT TATCGACATC GGCCGCTGGG TGCTGACGGA AGCGCTGCGC
CAGCTTGCGC GCTGGCACGT ATTGCTAGGC AAGGATTTCC AGATCTCGGT CAACAAATCC
CCAATGGAGT TCTGCGCGCC TTCAAGCGGA CCCGAGTCCT GGTCCAGCAT GATCGAGCGC
AGGAACGTGC CGGTGGGCAG CCTCGTCATC GAGATCACTG AAAACTCGCT GATGGAGCAG
AACGCCGATG TCATGGATCA GCTCTCCCGC TTTCAGGCGG CCGGCATCGA AATTGCGCTC
GACGACTTCG GCACCGGCTA CTCCTCCTTG TCGTACCTGC GGCGCCTGGA CATTGACTAC
ATCAAGATCG ACCGGTCCTT CATCCGCTCG CTGACGCGCG GTCCGGACGA CGTGGCCCTG
TGCCGCGCCA TCATCAACAT GGCGCACGCC CTGCGCATCC GTGTGATCGC CGAGGGCGTC
GAGACCCAGT CGCAACGCGA CATCCTGCTC GCTGCCGGCT GCGACTACGG GCAAGGCCAC
TTCTTCTGTC CTCCGGTAGA GGCCAGCGCA TTCGAGGCGT TCGTGAGCGC CGTGACCTGA
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| Protein sequence | MRERSTTRGK ALQRLRQVFS PLNLGAAAWL IATWSFAAFQ LVSERDRLLH DAADRTQAEA
LAFGAYSKSS ILRLSEFLLD LRASWLAGQT GFIDMVRERE NLVVDLTFQV AVIDKHGLLV
YSSIAPPASG EKVDLSGREH FRVHQDAGGR DMLFISDPVK GKVSGKWSIQ FTRPILREGS
FDGVIVVSVS PEQFASFAQT FTNRDGEVAS VIKSSGQVIA RVPSLEGSLA RAVTNRPYLA
SGSPQSGSYR AVSGSEGVER VFGYYRMPEF GLNFVVGESV GLVLAPYEVY RRIALAGAMA
STLLVGLLYY SLRRSMVERR RHLEEMRLAA LVYSSSSEAM MVTSVDGTII DANPAFAAAT
GYTVEEIKGR SGYGISGAGN AAGLVERLRA TLGAKGRWSG EFSIRRKDGS EFPAYLTVDT
YLAHQYGEHR RVALIHDMTE KRQAEEVIRH QANFDALTDL PNRRLFFERL EQEIERSRGT
QDVLALLFID LDRFKEVNDT LGHDQGDLLL LEAARRIAAS VRASDTVARL AGDEFTVILP
AVGDAGVAGG IAEAILQQIA APYRLAGELV VVSASIGVAT YPKDADNAEA LLVYADHAMF
AAKEEGRNRW KIFTQALLQA ERERLRITQD LRTALASEQF ALHYQPIVDL RTGKVCKAEA
LIRWNHPVRG PIHPVDFIAV AEESGLIIDI GRWVLTEALR QLARWHVLLG KDFQISVNKS
PMEFCAPSSG PESWSSMIER RNVPVGSLVI EITENSLMEQ NADVMDQLSR FQAAGIEIAL
DDFGTGYSSL SYLRRLDIDY IKIDRSFIRS LTRGPDDVAL CRAIINMAHA LRIRVIAEGV
ETQSQRDILL AAGCDYGQGH FFCPPVEASA FEAFVSAVT
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