Gene Reut_A1504 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagReut_A1504 
Symbol 
ID3609833 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia eutropha JMP134 
KingdomBacteria 
Replicon accessionNC_007347 
Strand
Start bp1623073 
End bp1624359 
Gene Length1287 bp 
Protein Length428 aa 
Translation table11 
GC content64% 
IMG OID637690893 
Productmajor facilitator transporter 
Protein accessionYP_295715 
Protein GI73541195 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0043837 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTGCTT GGTACAAGGC TGGATCGCCC CAGCAGAAAA AGACATTCTG GGCCTGCTAC 
TCCGGCTGGG CGCTGGATTC CTTCGACATG CAGATGTTCA GCTTCCTGTT GCCGGCCCTC
ACACTTACAT GGGGCCTGAC CAAGGCCGAG GTTGGCGTCC TCGGGACCGT TGCGCTGGTC
GTTACCGCGA TTGGCGGCTG GGGCGCCGGG ATCCTGAGCG ACCGTTACGG CCGCGCACGC
ATCCTGGTGC TGGCAATCAT CTGGTTTACC TTGTTCGGCG TGCTCGCCGG CTTCGCCCAG
TCTTACCAAC AGCTGTTGAT TGCCCGTACG CTGCAGGGCC TCGGCTTCGG CGGCGAATGG
GCGGTCGGGG CGGCATTGAT GGCAGAAGTC ATCGACTCCA GGCATCGCGG CAAGGCCATC
GGCTTCGTGC AGTCCGGTTT CGCGCTGGGG TGGGCACTAG CGGTCGTCGT CGCCACATTG
CTGCTGGCCT GGCTGCCCAA GGAAATGGCG TGGAGGGTGG CGTTCTGGAG CGGTATCATC
CCCGCCCTCA TCGTGTTGTT CATCCGGCGC CATGTCAAGG ACTCTTCGAT GTTCGAACGG
GCACGCCAGA GCCGCGCCCC GCGCGCCTCG CTGTCCTCGG TGTTCAATCG CAAGTACGCC
CGTACGCTAG CGCTGTCCAG CGTGCTGGTC ATCGGCCTGC AGGCCGGCTG CTACGCCATC
CTGGTCTGGC TGCCTTCCCT GCTGAACCAG CGGCAGGTCG CGGCCGGTTC GATGATCGTC
ACCGTATTCA TCATGGCCTT CGGCTCCTTC TGCGGCTTCG CGGTGACGGC TGACCTCTCG
GATCGCATCG GAAGGCGCCC TACGCTGATC CTGCTGTCTG TCTGCGCATG GATCGTGACG
GTCAGCTATA TGCTTTTGCC GCTGAACACC ACGCTGACAG CGATTCTCGG CTTCCTGGTG
GGTTTCTCCG CCATCGGCAT GTTCGCCGCG CTTGGCCCGT TCCTGAGCGA ACTGTTTCCT
ACCAATGTGC GCACCACTTG CATGGGATTC GCGTACAACG TGGGCAAGTC GATTGGAGCG
GGGTCCGTCG TCGGCGTCGG CGTGCTGTCC ACGCATATCG GCCTGGCCAA CGCCATGGGC
ACGTTCTGCC TGGTCGCTTA CGCCTTTGCG GTATTCGGCA TCATGCTGCT GCCCGAGACG
CGCGGCATCG CGATCGAGAA CATCGGCGAA GCCGATGCGC ACTCTCCCGC CGCACCGCTG
GCCCAGCCGG CAAGCGCTCG ATCCTGA
 
Protein sequence
MFAWYKAGSP QQKKTFWACY SGWALDSFDM QMFSFLLPAL TLTWGLTKAE VGVLGTVALV 
VTAIGGWGAG ILSDRYGRAR ILVLAIIWFT LFGVLAGFAQ SYQQLLIART LQGLGFGGEW
AVGAALMAEV IDSRHRGKAI GFVQSGFALG WALAVVVATL LLAWLPKEMA WRVAFWSGII
PALIVLFIRR HVKDSSMFER ARQSRAPRAS LSSVFNRKYA RTLALSSVLV IGLQAGCYAI
LVWLPSLLNQ RQVAAGSMIV TVFIMAFGSF CGFAVTADLS DRIGRRPTLI LLSVCAWIVT
VSYMLLPLNT TLTAILGFLV GFSAIGMFAA LGPFLSELFP TNVRTTCMGF AYNVGKSIGA
GSVVGVGVLS THIGLANAMG TFCLVAYAFA VFGIMLLPET RGIAIENIGE ADAHSPAAPL
AQPASARS