| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Reut_A1450 |
|---|
| Symbol | |
|---|
| ID | 3612027 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia eutropha JMP134 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007347 |
|---|
| Strand | - |
|---|
| Start bp | 1564640 |
|---|
| End bp | 1565689 |
|---|
| Gene Length | 1050 bp |
|---|
| Protein Length | 349 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 637690842 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_295664 |
|---|
| Protein GI | 73541144 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.308203 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATTGACC ATGCAGAATC CATAATTCGC ATACAAACAC GTTCGCCTTT GATGGAAATC
CGGCAACTCG AAGCCTTTGC AGCGGTCGTC ACGACCGGCA GCGTCACCGC CGCCGGCCGC
CTGCTCGGCC GCTCGCAGCC CGCTATCACT CGGCTGATCC AGGAGCTGGA AGGCGAACTG
GGCTTCGCGC TGTTCACGCG CAGCGGTCCG CGCGTGAGCC CTACGGAGCA AGGCTTCCTG
CTCTATGACG AGGTGGAACA GACGCTGGCG GGGCTGCAGC AGATCCGCAT GCGTGCTGCA
GCGCTTGCAC GTGGCGATGG CCGGCCGCTG CGCATCGCCG CCACGCCGGC ACTGTCGGCC
GGCTTGCTGC CCGCCGCGCT CGCGCTGGCG TTCGGGCGCG GGCTGTGCGC GCCGGAGCGC
GTGGAAGTGC AGAGTGTGTC GCCCGAGCAG GTCGTGCATG CGGTGCTGAC CGGCGCGGCC
GAAATCGGCG TGAACAGCCT GCCGCTCGAA CACCGCGGCG TGAACGTCCA TTGGATCGGA
CAGGCCGGCT GCGTGGCGGC GATGCGCGTC GACGATCCAC TCGCGGCCTG CGAGACTGTG
CGCCTGGCGG ACTGCCGCGA CCGCCGCATC GTCACGATGC AGAACCCGTA CCGCCTGCGG
CGCCGAACGG ATGCCGCCTT CAAGCGCGCT GGCATCGGCC CGGCCGGCGT GATCGACACC
AATACGTCGA TCAATGCGCT GACACTGGTG CGCGCCGGGC TCGGCATCGC CGTACTGGAA
CCCATAACCG CGCGCGGCCT GCCGCTCGCC GACATCGCCG TGCGCCCCGT CGACGCGGAC
ATCCCGTTCT ATTTCGGCGT GATCACGCCG CAAGCGCGCC CGGCCAGTGC CGTCGTACTC
GGACTGGTCG ACCTGCTGGC CGAGGCCTCT GCCGCGCTGC TGCCTGATTT CGTGCGCCGC
GGTCCCGCCG AACATGGCGC GCTACTGCAG TCGCTGTATG GCGACGGCGC AGCCCCGACT
GAAGATATCG AATCCCTGAG TCATGACTGA
|
|---|
| Protein sequence | MIDHAESIIR IQTRSPLMEI RQLEAFAAVV TTGSVTAAGR LLGRSQPAIT RLIQELEGEL
GFALFTRSGP RVSPTEQGFL LYDEVEQTLA GLQQIRMRAA ALARGDGRPL RIAATPALSA
GLLPAALALA FGRGLCAPER VEVQSVSPEQ VVHAVLTGAA EIGVNSLPLE HRGVNVHWIG
QAGCVAAMRV DDPLAACETV RLADCRDRRI VTMQNPYRLR RRTDAAFKRA GIGPAGVIDT
NTSINALTLV RAGLGIAVLE PITARGLPLA DIAVRPVDAD IPFYFGVITP QARPASAVVL
GLVDLLAEAS AALLPDFVRR GPAEHGALLQ SLYGDGAAPT EDIESLSHD
|
|---|
| |