| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Reut_A1427 |
|---|
| Symbol | |
|---|
| ID | 3609988 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia eutropha JMP134 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007347 |
|---|
| Strand | - |
|---|
| Start bp | 1543815 |
|---|
| End bp | 1544708 |
|---|
| Gene Length | 894 bp |
|---|
| Protein Length | 297 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 637690819 |
|---|
| Product | 3-hydroxyisobutyrate dehydrogenase |
|---|
| Protein accession | YP_295641 |
|---|
| Protein GI | 73541121 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG2084] 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.204694 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCCCGGA ATATCGGCGT AATCGGCCTT GGCGCCATGG GCAACGGTGT CGCGCAGTCG
CTGCTGCGAG CCGGATTTAC CGTGCACGCC TGCGACCTTC GGCCCGACGT GCTGCAGCGT
TTTGCCGACG CCGGCGGCGT GCCGTGCGCA AGCCCCGCCG AACTGGGCAG CCGCTGCGAT
GTCGTGATCA CGCTGGTAGT CAACGCCCAG CAGACAGAGG CCGTTCTGTT CGGTGCCGAC
GGTGCCGCCA CGACGATGCA CTCCGGCACG CTGGTGATCG CGAGCGCGAC CGTGCCGCCC
TCGTTTGCCG AAGCGCTGGG CCGTCGCCTG GGCGAGCAAG GCATCCTTCT GCTCGATGCC
CCGGTGTCCG GGGGCGCGGC GCGGGCGGCC AGCGGCGAGA TGACCATGAT GACGTCCGGA
CCCGCCGAAG CGTATTCGCT GGCCGAGGAC GTGCTGGCCG CGATCTCCGG CAAGGTCTAC
CGCCTCGGCA ACGCGCATGG TGCCGGCTCC AAGGTCAAAA TCATCAACCA GCTTCTGGCG
GGCGTGCATA TCGCCGCCGC GGCGGAGGCC ATGGCACTGG GCCTGCGCGA AGGTGTGGAC
CCGGATGCGC TGTACGACGT CATCACCCAT AGCGCCGGCA ATTCGTGGAT GTTCGAGAAC
CGCGTGCCGC ATATCCTGTC GGGCGACTAC ACGCCGCTGT CCGCAGTCGA TATCTTCGTC
AAGGACCTCG GCATGGTGCT CGATACCGCG CGCACCAGCA AATTCCCGCT GCCGCTGTCC
GCCGCCGCGC ACCAGATGTT CATGATGGCC TCCACCGCCG GCCACGGCGG CGAAGACGAT
TCCGCCGTGA TCAAGATCTT CCCCGGCATC GAACTGCCGG CCAAGGCAGA GTGA
|
|---|
| Protein sequence | MSRNIGVIGL GAMGNGVAQS LLRAGFTVHA CDLRPDVLQR FADAGGVPCA SPAELGSRCD
VVITLVVNAQ QTEAVLFGAD GAATTMHSGT LVIASATVPP SFAEALGRRL GEQGILLLDA
PVSGGAARAA SGEMTMMTSG PAEAYSLAED VLAAISGKVY RLGNAHGAGS KVKIINQLLA
GVHIAAAAEA MALGLREGVD PDALYDVITH SAGNSWMFEN RVPHILSGDY TPLSAVDIFV
KDLGMVLDTA RTSKFPLPLS AAAHQMFMMA STAGHGGEDD SAVIKIFPGI ELPAKAE
|
|---|
| |