Gene Reut_A1381 details

Gene Information

• Locus tag: Reut_A1381
• Symbol: clpX
• ID: 3611172
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Ralstonia eutropha JMP134
• Kingdom: Bacteria
• Replicon accession: NC_007347
• Strand: +
• Start bp: 1488600
• End bp: 1489877
• Gene Length: 1278 bp
• Protein Length: 425 aa
• Translation table: 11
• GC content: 60%
• IMG OID: 637690771
• Product: ATP-dependent protease ATP-binding subunit ClpX
• Protein accession: YP_295595
• Protein GI: 73541075
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG1219] ATP-dependent protease Clp, ATPase subunit
• TIGRFAM ID: [TIGR00382] endopeptidase Clp ATP-binding regulatory subunit (clpX)

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 0.420735
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCGGAAA AAAAAGGTTC ATCCAGCGAA AAGCTTCTCT ACTGCTCCTT CTGCGGCAAG 
AGCCAGCATG AAGTGAAGAA GCTGATTGCC GGCCCGTCGG TGTTCATCTG CGACGAATGC 
ATCGACCTGT GCAACGAAAT CATCCGCGAC GAAGCCACTG CGTCCGAGAA GGATGCGGCT 
GCGGCCACCC GTTCCGACCT GCCCACACCG CATGAAATCC GCGAAAGCCT GGACCAGTAT 
GTGATCGGGC AGGAGCAGGC CAAGAAGATT CTGGCCGTGG CGGTGTACAA CCATTACAAG 
CGCCTCAAGC ACCTCGGCAA GAAGGACGAC GTCGAGCTCT CGAAGAGCAA TATCCTGCTG 
ATCGGCCCCA CCGGTTCGGG AAAGACGCTG CTGGCCCAGA CGCTGGCGCG CCTGCTCAAC 
GTGCCGTTCG TGATCGCGGA CGCGACCACG CTGACCGAAG CAGGCTATGT CGGCGAGGAT 
GTCGAGAACA TCATCCAGAA GCTGCTGCAG AACTGCAATT ACGAGGTCGA GAAGGCGCAG 
CGCGGTATTG TCTACATCGA CGAAATCGAC AAGATCTCGC GCAAGTCGGA CAACCCGTCG 
ATCACGCGCG ATGTCTCGGG CGAGGGCGTC CAGCAGGCAC TGCTCAAGCT GATCGAAGGC 
ACCATGGCAT CGGTGCCGCC GCAAGGTGGC CGCAAGCATC CAAACCAGGA CTTCCTGCAG 
GTCGACACCA CGAACATCCT GTTCATTTGC GGTGGCGCGT TCGATGGCCT CGAGAAGGTC 
ATCATGCAGC GCTCGGACAA GACTGGCATC GGTTTTGCTG CGCAGGTGCA AAGCAAGGAA 
GAACGCGAAG TCAGCGAAGT GCTGCCGCAG ACCGAACCGG AAGACCTGAT CAAGTTCGGC 
CTGATTCCCG AACTGATCGG CCGCCTGCCG GTCGTGGCTA CGCTGGCCAA GCTCGACGAA 
ACCGCGCTGG TGCAGATCCT GATCGAGCCG AAGAACGCGC TGGTCAAGCA GTACCAGAAG 
CTGCTGGCGA TGGAAGGCGT GGAACTGGAA ATCCGCCCTG CGGCACTGTC GGCGATCGCG 
CGCAAGGCGA TCCGTCGCAA GACGGGTGCG CGTGGATTGC GTTCCATCCT GGAGCAATCG 
CTGATGGACG TTATGTACGA CCTGCCGAAC TACAAGGGCG TGCAAAAAGT GGTCATCGAC 
GAGAGCACCA TCAACGGAGA CGCCCCGCCG CTGCTGATGT ACGAGGAACA GCAGCCGAAG 
GTGTCAGGCT CCAACTGA 

 

Protein sequence

MAEKKGSSSE KLLYCSFCGK SQHEVKKLIA GPSVFICDEC IDLCNEIIRD EATASEKDAA 
AATRSDLPTP HEIRESLDQY VIGQEQAKKI LAVAVYNHYK RLKHLGKKDD VELSKSNILL 
IGPTGSGKTL LAQTLARLLN VPFVIADATT LTEAGYVGED VENIIQKLLQ NCNYEVEKAQ 
RGIVYIDEID KISRKSDNPS ITRDVSGEGV QQALLKLIEG TMASVPPQGG RKHPNQDFLQ 
VDTTNILFIC GGAFDGLEKV IMQRSDKTGI GFAAQVQSKE EREVSEVLPQ TEPEDLIKFG 
LIPELIGRLP VVATLAKLDE TALVQILIEP KNALVKQYQK LLAMEGVELE IRPAALSAIA 
RKAIRRKTGA RGLRSILEQS LMDVMYDLPN YKGVQKVVID ESTINGDAPP LLMYEEQQPK 
VSGSN