| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Reut_A1344 |
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| Symbol | |
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| ID | 3608956 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia eutropha JMP134 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007347 |
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| Strand | + |
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| Start bp | 1444842 |
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| End bp | 1446053 |
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| Gene Length | 1212 bp |
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| Protein Length | 403 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637690733 |
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| Product | ribosomal large subunit pseudouridine synthase D |
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| Protein accession | YP_295558 |
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| Protein GI | 73541038 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGAAAA ATAGCGTCAA GCATTATAGC CCAAGCCCTC AGCCAGAATC CGGCGTGGGG
GGAGTGCCGC CTGAACAGGT GCGCGTCCAG GCATCCCAGA CCGATAACGA TGACACCGAC
GACTTCGCTG ACGAGGTGCC CGCAGCACCC GTAAACGACC TGTCGGTGCC GCTGACATTG
GAAGTTGACA GCGTCGCACA TGGCGAGCGG CTGGACAAGC TGCTTGCGCG GCACTTCAGC
GAGTTTTCAC GCAGCCGGCT GCAGCAGTGG ATCGAAAGCG GGGCGGTACG CGTCGACGGT
GAAGTACGCC GGCCGCGCGA CGCAGTGCAG ATGGGCAATC GCATCGAGGT CCAGCCGCAG
GCTGCGCCGG AATCGCAGGC CTTCGCCCCC GAAGATGTCG CGCTGGACGT CGTGTACGAA
GACGACGCAC TTCTGGTCAT CGACAAGCCC GCCGGGCTGG TCGTGCATCC GGCCGCGGGC
AACTGGAGCG GTACGGTCCT CAACGGACTG CTGCATCGCG ACCCAACGGC AGCGGCGTTG
CCGCGCGCAG GTATCGTGCA CCGGCTGGAC AAGGAGACTT CGGGCCTGAT GGTGGTTGCG
CGCACGCTGA CGGCGCAGAC CGACCTCGTG CGCCAGCTCC AGGCCCGCAC CGTCAAGCGC
ACGTATCTCG CGCTGGTATG GGGACGTATA TACGAGGAGG GCACCATCGA CGCCCCGATC
GGCCGTGATC CGCGTGAGCG CACGCGCATG GCCATCGTCC ACACCAACAG CGGCAAGCCC
TCGCGCACGC ACTTCCGCAC GCTGGCCACG GTGCCTCTCG GGCGCAGTTT CGTGTCGATG
GTGCGCTGCC AGCTCGAAAC CGGGCGCACG CACCAGATCC GCGTGCACTT CGAATCGATC
GGCCATCCGC TGGTGGGGGA TCCGGTCTAT TACCGCGCGA CGCAACGCGG GCAGCGGCCA
GCCATTCGCG TACCGCTGCC AGTGCCATTC GAACGGCAGG CGCTGCATGC GTTCAAGCTC
GGGCTGGTGC ACCCGGTCAC TGGCAAGACC GTGTCGTGGA CCGCGCCGCC GCCGGAAGAC
CTCCAGGCGC TGATCGATGC GCTCGATTTC TCTGGCGGTG AAACCGAAGC CGATGAGGAC
GACTGGGACG AAGAGTGGGA AGATGGCCCC GAAGTCATCT GGGCCGACGG GGAGGGTGAC
GATGACGACT GA
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| Protein sequence | MKKNSVKHYS PSPQPESGVG GVPPEQVRVQ ASQTDNDDTD DFADEVPAAP VNDLSVPLTL
EVDSVAHGER LDKLLARHFS EFSRSRLQQW IESGAVRVDG EVRRPRDAVQ MGNRIEVQPQ
AAPESQAFAP EDVALDVVYE DDALLVIDKP AGLVVHPAAG NWSGTVLNGL LHRDPTAAAL
PRAGIVHRLD KETSGLMVVA RTLTAQTDLV RQLQARTVKR TYLALVWGRI YEEGTIDAPI
GRDPRERTRM AIVHTNSGKP SRTHFRTLAT VPLGRSFVSM VRCQLETGRT HQIRVHFESI
GHPLVGDPVY YRATQRGQRP AIRVPLPVPF ERQALHAFKL GLVHPVTGKT VSWTAPPPED
LQALIDALDF SGGETEADED DWDEEWEDGP EVIWADGEGD DDD
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