| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Reut_A1343 |
|---|
| Symbol | |
|---|
| ID | 3608955 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia eutropha JMP134 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007347 |
|---|
| Strand | - |
|---|
| Start bp | 1443995 |
|---|
| End bp | 1444810 |
|---|
| Gene Length | 816 bp |
|---|
| Protein Length | 271 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637690732 |
|---|
| Product | transmembrane protein |
|---|
| Protein accession | YP_295557 |
|---|
| Protein GI | 73541037 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4105] DNA uptake lipoprotein |
|---|
| TIGRFAM ID | [TIGR03302] outer membrane assembly lipoprotein YfiO |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCGCG CCAATTGGCG CGCGCGATTT GGAGCGATTC TGCTCGCAGG CGGCTGCGTC
ATGCTGTCGG CATGCGGCCT GCTTGCTGAC CAACCCGACG AGACCGCTGG CTGGTCGGCC
AACAAATTAT ATTCGGAAGC CAAGGACGCC CTCGATGGCG GCGACTATTC CCGTGCCGTG
AAGCTGTATG AAAAGCTCGA AGGCCGCTAT CCGTTCGGCC GCTACGCGCA GCAAGCCCAG
ATCGACACCG CCTACGCCAG CTACAAGGAC GGCGAGACCG CAGCGGCACT GGCCGCGGTG
GACCGCTTCA TCCAGCTGCA CCCGAGCCAT CCCAATATCG ATTACGCCTA CTACCTCAAG
GGCCTGATCA ACTTCAACGA CAACCTGGGC TGGCTGGGCC GCTTCTCCGG CCAGGATCTC
AGCGAGCGCG ACCCGAAGGC GGCCCGCGCG GCGTACGACG CCTTCAACAC GCTGGTCACG
CGCTTCCCCG ACAGCAAGTA CACGCCTGAC GCCGCTGCGC GCATGCAGTA CATCGTCAAC
TCGCTGGCCC AGCACGAAGT CCATGCGGCG CGCTACTACT ACAAGCGCGG CGCCTACCTG
GCGGCGGTCA ACCGCGCGCA GCAGGCACTC AAGGACTATG ACGGCGCGCC CGCCAACGAG
GAAGCGCTGT ACATCATGAT CCGCTCGTAC GACTCGCTCG GCATGAAGGA TCTGCGTGAC
GATACCGCCC GCGTGATGGA GCGCAACTTC CCGAACAGCG ACTACATCAA GTACGGCGAG
CGCCGCAAGG ACAAGTCCTG GTGGGAAGTG TTCTGA
|
|---|
| Protein sequence | MKRANWRARF GAILLAGGCV MLSACGLLAD QPDETAGWSA NKLYSEAKDA LDGGDYSRAV
KLYEKLEGRY PFGRYAQQAQ IDTAYASYKD GETAAALAAV DRFIQLHPSH PNIDYAYYLK
GLINFNDNLG WLGRFSGQDL SERDPKAARA AYDAFNTLVT RFPDSKYTPD AAARMQYIVN
SLAQHEVHAA RYYYKRGAYL AAVNRAQQAL KDYDGAPANE EALYIMIRSY DSLGMKDLRD
DTARVMERNF PNSDYIKYGE RRKDKSWWEV F
|
|---|
| |