| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Reut_A1298 |
|---|
| Symbol | |
|---|
| ID | 3611933 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia eutropha JMP134 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007347 |
|---|
| Strand | - |
|---|
| Start bp | 1387353 |
|---|
| End bp | 1389431 |
|---|
| Gene Length | 2079 bp |
|---|
| Protein Length | 692 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637690686 |
|---|
| Product | oligopeptidase A |
|---|
| Protein accession | YP_295512 |
|---|
| Protein GI | 73540992 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0339] Zn-dependent oligopeptidases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.757231 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGACCAAG CCGTCAACAA TCCACTGCTG GACTTCACCG ACCTGCCGCG CTTCTCCGAG
ATCCGCCCCG AGCACATCAG CCCGGCGCTC GACGTGCTGC TCGAGCGTGC CCAGGCTGCC
GTGGCCCGCG CCGAAGACCC CGCCACGCCG GCCGACTGGG GGAATGCCGT CGAGGCACTG
GAAACCGCCA CCGAGCCGCT GGGGCGCGCG TGGGGCGTGG TCGGCCATCT GAGCGCGGTC
GCCGACACGC CGGAACTGCG CAAGGCGCAC GCCGAAAACC TGCCGCGCAT GACCGAGTTC
TGGTCGTCGC TCGGACAGAG CCTGGCGCTC TATGAAAAGT ACAAGGCGCT CGCAGCCAGC
CCCGAGTTCG CCGGCATGGA CGCCGCGCGC CACCAGCTGA TCGAGAACGA GCTGCGCGGC
TTCCGCCTGG GCGGCGCCGA ACTGCCCGAA GACAAGAAGC CACGCTTTGC CGAGATCCAG
GAACACCAGG CGCAGCTGTC CAAGGCGTTT TCCGACCACG TGCTCGATGC CACCAATGCG
TACGCGCTGA TCATCGAAGA CCCCGCGCGT CTGTCCGGCT TGCCCGAAGA CGCGAAGGAA
GCCGCGCGCC ACGCCGCCGA GAAGGACGGC AAGGCCGGCT GGAAGTTCAC ACTGCACTTC
CCGTCCTATT TCCCCGTGCT CCAATACGCG GACGACCGCG CGCTGCGCCA GACCCTGTAC
GAAGCCAACG TGACACGTGC GTCGGCGCAG GCCCCGCAGT ACGGCAACGG CCAGGCCGAT
TGGGACAACA CGGACAATAT GCGCGAGCAG CTCGCGCTGC GCCGCGAAGA AGCGCAGATG
CTCGGCTACC AGTGCTACGG CGAAGTCTCG CTGGTGCCGA AGATGGCCGA ATCGCCGGCC
GAGGTGCTCA AGTTCCTCGA TGAACTCGCC GTCAAGGCGC GTCCGTATGC CGAGAAGGAC
TGGGCCGAAC TCAGGGCCTT CGCTGCGGCG GAACTGGGAC TGGCCGAACT CGCACCGTGG
GACGTCGCCT ACGCCTCCGA AAAGCTGCGC GAGCAGCGCT ATGCGTTCTC CGAACACGAG
GTGAAGCAGT ACTTCCCCGA GCACAAGGTG CTGCAGGGCC TGTTCGGTGC TGTGGAGCGG
CTGTTCTCGG TCAAGATCCA GCCCGACCAG TCGCAGACCT GGCACAAGGA TGTGCGCTTC
TTCCGCGTGA GCGCGACCGA TGGCACGCTG CTCGCCCAGT TCTATATCGA CCTCTATGCG
CGCGAGGGCA AGCGCGGCGG TGCGTGGATG GATGATGCGC GTGGGCGCAA GATCCTCGCA
GACGGCGAGG TGCAAACACC CGTGGCCTAC CTGACCTGCA ACTTCTCGTC GCCGGTCGGC
GACAAGCCCG CGCTGTTCAC GCACGACGAA GTCATCACGC TGTTCCATGA GTTCGGCCAT
GGCCTGCACC ATATGCTGAC GCAGGTTGGC GAGTTGGGCG TGTCTGGCAT CAACGGCGTG
GAATGGGATG CAGTCGAGCT GCCGTCCCAG TTCATGGAGA ACTTCTGCTG GGAATTCGAA
GTGCTCAGCG GCATGACGCA GCATGTCGAC AGCGGCGAGC CGCTGCCGCG CGCGCTGTTT
GACCGCATGC TCGCCGCCAA GAATTTCCAG AACGGCATGA TGACGCTTCG CCAGATCGTG
TTCTCGTCCT TCGACATGCA CCTGCACACC GACTTCGATC CGCAAGGTGC CAAGTCGGTG
CTCGACCTGT CGCGCGAGAT CAACGACCGC GTGCATGTGG TGCCACAGTA CCCGCTGTCG
CGCTGGCCCA ATACCTTCAG CCACATCTTC GCTGGCGGCT ATGCCGCGGG CTACTACAGC
TACAAGTGGG CTGAAGTGCT GTCGGCCGAC GTGTATGCCG CGTTCGAAGA AGCCGCGCAA
CTTTCGGGCA CCGTGCTCGA CAGTGAAACC GGCGCTCGCT ACCAGCGCGA GATCCTGTCG
GTCGGCGGCA GCCGCCCGGC CATGGATTCG TTCGTCGCGT TCCGCGGCCG CGCGCCGCAG
ATCGACGCGC TGCTGCGCCA CGGAGGCATG GCAGCATGA
|
|---|
| Protein sequence | MDQAVNNPLL DFTDLPRFSE IRPEHISPAL DVLLERAQAA VARAEDPATP ADWGNAVEAL
ETATEPLGRA WGVVGHLSAV ADTPELRKAH AENLPRMTEF WSSLGQSLAL YEKYKALAAS
PEFAGMDAAR HQLIENELRG FRLGGAELPE DKKPRFAEIQ EHQAQLSKAF SDHVLDATNA
YALIIEDPAR LSGLPEDAKE AARHAAEKDG KAGWKFTLHF PSYFPVLQYA DDRALRQTLY
EANVTRASAQ APQYGNGQAD WDNTDNMREQ LALRREEAQM LGYQCYGEVS LVPKMAESPA
EVLKFLDELA VKARPYAEKD WAELRAFAAA ELGLAELAPW DVAYASEKLR EQRYAFSEHE
VKQYFPEHKV LQGLFGAVER LFSVKIQPDQ SQTWHKDVRF FRVSATDGTL LAQFYIDLYA
REGKRGGAWM DDARGRKILA DGEVQTPVAY LTCNFSSPVG DKPALFTHDE VITLFHEFGH
GLHHMLTQVG ELGVSGINGV EWDAVELPSQ FMENFCWEFE VLSGMTQHVD SGEPLPRALF
DRMLAAKNFQ NGMMTLRQIV FSSFDMHLHT DFDPQGAKSV LDLSREINDR VHVVPQYPLS
RWPNTFSHIF AGGYAAGYYS YKWAEVLSAD VYAAFEEAAQ LSGTVLDSET GARYQREILS
VGGSRPAMDS FVAFRGRAPQ IDALLRHGGM AA
|
|---|
| |