Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Reut_A1281 |
Symbol | ihfA |
ID | 3609272 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia eutropha JMP134 |
Kingdom | Bacteria |
Replicon accession | NC_007347 |
Strand | + |
Start bp | 1368082 |
End bp | 1368498 |
Gene Length | 417 bp |
Protein Length | 138 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637690666 |
Product | integration host factor subunit alpha |
Protein accession | YP_295495 |
Protein GI | 73540975 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0776] Bacterial nucleoid DNA-binding protein |
TIGRFAM ID | [TIGR00987] integration host factor, alpha subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.561954 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAGATC GAGACGCGAA CTCCATGACC GCAGCAGCTT TGGGCGAGAT GAGCGACCGG CAGGCTTCCT CCCGCGACGA CTCCATGCCG GAAAACCGCG CCGCCGAGGT GCCGACGCTG ACCAAGGCCG AACTCGCCGA AATGCTGTTC GACCAGGTCG GCCTGAACAA ACGCGAATCG AAAGACATGG TCGAAGCCTT CTTCGACGTC ATTCGGGAAG CGCTGGAGCA GGGCGACAGC GTCAAGCTCT CCGGCTTCGG CAACTTCCAG TTGCGCGACA AGCCGCAGCG CCCGGGCCGC AATCCGAAGA CCGGTGAAGT CATTCCCATC ACCGCGCGCC GCGTCGTGAC ATTCCACGCA AGCCAGAAGC TCAAGAGCCT GGTGGAAGAG CGTGCGGGCC TGGACGTGCC GGGCTGA
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Protein sequence | MKDRDANSMT AAALGEMSDR QASSRDDSMP ENRAAEVPTL TKAELAEMLF DQVGLNKRES KDMVEAFFDV IREALEQGDS VKLSGFGNFQ LRDKPQRPGR NPKTGEVIPI TARRVVTFHA SQKLKSLVEE RAGLDVPG
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