| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Reut_A1195 |
|---|
| Symbol | |
|---|
| ID | 3611533 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia eutropha JMP134 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007347 |
|---|
| Strand | - |
|---|
| Start bp | 1277364 |
|---|
| End bp | 1278083 |
|---|
| Gene Length | 720 bp |
|---|
| Protein Length | 239 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637690580 |
|---|
| Product | NAD-dependent epimerase/dehydratase:Short-chain dehydrogenase/reductase SDR |
|---|
| Protein accession | YP_295410 |
|---|
| Protein GI | 73540890 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
|---|
| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.821912 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATTCCAG AATCGGTTCT TGTCACCGGA GGCTCCGGCG GTATTGGCTG GGCCTTGTGC
CAGACCCTGG CGAGACGCGG CAGCCATGTC GTGAGCATCG ACCGCGCCCT GCCGCCGCAG
CCAGGCATCG TGGAATTCTA CGAAGCAGAC ATGGCCAGTG AAGCCGAACT TGCTGCAGTC
CTGCGCGATG CCTGCGGCAA GTATGCATTC GGCGGGCTCG TCAACAATGT CGCCACGCTG
CGCCCCGCCA GCATCGGTGA TACGACGCTG GACGACTTCG ACAGCCAGAT GCTGGTCAAC
GCCCGCGCCG CCCTGCAATG CGCACAGGCG GCTCTGCCCG CCATGCGCGC GGCACGACAG
GGCCGCATTG TCAACATTTC CAGCCGCGCG GCGCTTGGCA AGGAAATGCG CACGGCGTAC
GCCGCGACCA AGGGTGCGCT CAATGCAATG ACCCGGACGT GGGCGCTCGA ATTAGGCGCG
GATGGCATTA CCGTGAATGC GGTCGCGCCC GGGCCAATTG CCACTGCGGC GTTCGGAACG
GCCAATCCGG CACAGCAGGC ACTGACGCAA CGGATTGTCG CCGGCGTCCC CGTGAAACGG
CTGGGAAACG CCGACGACAT CGTCCACGCC GTGGAGTTCT TCCTGGATAC GCGCGCTTCG
TTCGTGACAG GGCAGATCCT GCATGTGTGC GGCGGCATTA CCGTGGGGTT GTCAGCATGA
|
|---|
| Protein sequence | MIPESVLVTG GSGGIGWALC QTLARRGSHV VSIDRALPPQ PGIVEFYEAD MASEAELAAV
LRDACGKYAF GGLVNNVATL RPASIGDTTL DDFDSQMLVN ARAALQCAQA ALPAMRAARQ
GRIVNISSRA ALGKEMRTAY AATKGALNAM TRTWALELGA DGITVNAVAP GPIATAAFGT
ANPAQQALTQ RIVAGVPVKR LGNADDIVHA VEFFLDTRAS FVTGQILHVC GGITVGLSA
|
|---|
| |