Gene Reut_A1081 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagReut_A1081 
Symbol 
ID3611695 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia eutropha JMP134 
KingdomBacteria 
Replicon accessionNC_007347 
Strand
Start bp1173667 
End bp1175538 
Gene Length1872 bp 
Protein Length623 aa 
Translation table11 
GC content70% 
IMG OID637690472 
Productphosphogluconate dehydratase 
Protein accessionYP_295303 
Protein GI73540783 
COG category[E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism 
COG ID[COG0129] Dihydroxyacid dehydratase/phosphogluconate dehydratase 
TIGRFAM ID[TIGR01196] 6-phosphogluconate dehydratase 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.685711 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCCCACG CCGTCCATGC CGAAATCCTT GCCGTAACCC GGCGCATCAC CGAGCGCAGC 
CGCGCCAGCC GCGCGGCCTA CCTGGCGCGC TGCGAACGCG CCCAGGCAGA GCTTGGCCCG
CTGCGCGGCC TCTCGTGCGC TAACCTGGCC CACGGCTTTG CCGCGCTGCC GGCGCATGAC
AAGCTGAAGC TTCGCGTCGA ACACGCACCG AACCTCGGCA TCGTGACGGC CTACAACGAC
ATGCTGTCGG CGCACCAGCC GTACGAGCGC TATCCCGACG TGATTCGTGA GGCCGCACGT
GCCGTGGGCG CCGTGGCGCA GGTTGCCGGC GGCGTGCCGG CGATGTGCGA CGGCATTACG
CAGGGCAACC CGGGCATGGA GCTGTCGCTG TTCTCGCGCG ATGCAATTGC CATGAGCACG
GCGGTCTCGC TCTCGCACAA CACCTTTGAC GCCGCGGTGA TGCTTGGCGT GTGCGACAAG
ATCGTGCCGG GGCTGGTCAT GGGCGCGCTG CAGTTCGGCC ACCTGCCGGT CGTGTTCGTG
CCGGCCGGGC CGATGGCGAG CGGCCTCCCG AACAAGGAAA AGGCGCGCGT GCGCCAGCTT
TATGCGACCG GCCAGGTTGG CCGCGAAGCC TTGCTTGAAG CCGAGTGCGA GGCCTACCAC
AGCGCAGGTA CGTGCACGTT CTACGGCACC GCCAACAGTA ACCAGTTCCT GATGGAAATC
ATGGGCCTGC ACCTGCCCGG TGCAGCCTTC GTCCACCCGG ACAGCGGCTT GCGCGATGCC
CTGACCGCAG CGGCGGCGCA GCGCGCGCTG GCGCTGTCGG CGCGAGGCAC TGAATACATG
CCGATGGCGC GCATCGTCGA CGAGCGTGCC GTCGTCAATG CGATGGTCGG CCTGCTGGCC
ACCGGCGGTT CCACCAACCA CACCATCCAC CTGGTCGCCA TGGCGCGTGC CGCGGGCGTG
CTGATCGACT GGGACGATTT CGACCGGCTG TCCGGCATCA CGCCGCTGCT GGCGCGCGTG
TATCCGAACG GCTCGGCGGA CGTGAACCAT TTCCACGCCG CGGGCGGCAC GGGCTTTGTG
ATCGGCCAGC TTCTGGAGGC CGGGCTCCTG CACGAGGACG TGCAGACCGT CGCCGGCCCG
GGTCTCGCGC GCTACACGCA GGAGCCGGTG CTGGCCGATG GCGTGCTGCG CTGGCGCGAT
GGCGCGAGCA CCAGCGGCGA CGCGCAGGTG CTGGCCACGG CGGCGGAGCC GTTCTCCGCC
GAAGGCGGCC TGCGCCTGAT GCAGGGCAAC CTGGGGCGCG GCGTGATCAA GGTGTCCGCC
GTGGCGCCGG AGCACCGCGT GGTCGAGGCG CCGGCGCGCG TGTTCGATTC GCAGGAAGCG
CTGCAGGCAG CCTTCAATGC AGGCGAGCTC AACGGCGACG TGGTAGCCGT GGTGCGCTTC
CAGGGACCCA ATGCCAATGG CATGCCCGAA TTGCATCGCC TCACGCCCGT GCTTGGTGCG
CTGCAGGACG CCGGCCACAG CGTCGCGCTG GTGACGGACG GGCGTATGTC CGGTGCATCG
GGCAAGGTGC CGGCGGTGAT CCACGTCGGC CCCGAGGCGC TGGCTGGCGG CCCGCTGGCC
CGGGTGCGTG ACGGCGACCG CGTGCGTGTG GACGCCGTTG CCGGCACGCT TGCCTGGCTT
GGCGATCCGG CGGAATTCGC CGCGCGTTCG GTCGCGCCCG CGCCGGACGA TGGCTTCGCC
CAGTTCAGCG TCGGCCGGGG GCTGTTCGGC CTGTTCCGGC GCCACGCGCG CAAGGCGGAA
GAGGGTGGCA GTGCACTCGA CCTGTCCGAA GCCGACGCCG TTCCCGCGGC GACGCATTCC
GTCGCACAAT AG
 
Protein sequence
MPHAVHAEIL AVTRRITERS RASRAAYLAR CERAQAELGP LRGLSCANLA HGFAALPAHD 
KLKLRVEHAP NLGIVTAYND MLSAHQPYER YPDVIREAAR AVGAVAQVAG GVPAMCDGIT
QGNPGMELSL FSRDAIAMST AVSLSHNTFD AAVMLGVCDK IVPGLVMGAL QFGHLPVVFV
PAGPMASGLP NKEKARVRQL YATGQVGREA LLEAECEAYH SAGTCTFYGT ANSNQFLMEI
MGLHLPGAAF VHPDSGLRDA LTAAAAQRAL ALSARGTEYM PMARIVDERA VVNAMVGLLA
TGGSTNHTIH LVAMARAAGV LIDWDDFDRL SGITPLLARV YPNGSADVNH FHAAGGTGFV
IGQLLEAGLL HEDVQTVAGP GLARYTQEPV LADGVLRWRD GASTSGDAQV LATAAEPFSA
EGGLRLMQGN LGRGVIKVSA VAPEHRVVEA PARVFDSQEA LQAAFNAGEL NGDVVAVVRF
QGPNANGMPE LHRLTPVLGA LQDAGHSVAL VTDGRMSGAS GKVPAVIHVG PEALAGGPLA
RVRDGDRVRV DAVAGTLAWL GDPAEFAARS VAPAPDDGFA QFSVGRGLFG LFRRHARKAE
EGGSALDLSE ADAVPAATHS VAQ