| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Reut_A0964 |
|---|
| Symbol | |
|---|
| ID | 3609360 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia eutropha JMP134 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007347 |
|---|
| Strand | + |
|---|
| Start bp | 1050819 |
|---|
| End bp | 1052072 |
|---|
| Gene Length | 1254 bp |
|---|
| Protein Length | 417 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 637690356 |
|---|
| Product | NADH dehydrogenase subunit D |
|---|
| Protein accession | YP_295187 |
|---|
| Protein GI | 73540667 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0649] NADH:ubiquinone oxidoreductase 49 kD subunit 7 |
|---|
| TIGRFAM ID | [TIGR01962] NADH dehydrogenase I, D subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.389115 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCAGACA TCAAGAATTA CACCCTGAAC TTCGGACCGC AGCACCCGGC CGCGCACGGC
GTGCTGCGCC TCGTGCTGGA GCTGGACGGC GAAGTGATCC AGCGTGCCGA CCCGCACATC
GGCCTGCTGC ATCGTGCCAC CGAAAAGCTG GCAGAGCAGA AGAGCTGGAT CCAGAACGTT
CCATACATGG ACCGTCTCGA CTACGTGTCG ATGATGTCCA ACGAACACGC CTATGTGATG
GCGATCGAGC GGCTGCTTGG CATCGAAGTG CCGATCCGCG CGCAGTACAT CCGTGTGATG
TTCGACGAAA TCACTCGCCT GCTGAACCAC CTGATGTGGA TCGGTGCGCA TGCGCTCGAC
GTGGGCGCGA TGGCGGTGTT CCTCTACGCG TTCCGCGAGC GCGAGGACAT GTTCGACATG
TACGAGGCGG TGTCGGGCGC GCGCATGCAC GCGGCCTACT ACCGTCCGGG CGGCGTGTAT
CGCGACCTGC CTGACACAAT GCCGCAATAT CGCGCGTCCA AGGTTCACAA CGAGCGTGCC
ATCAAGGTCA TGAACGAAGC CCGTTCAGGC TCGCTGCTGG ACTTTATCGA GGACTTCACC
AACCGGTTCC CGAAGTACGT CGACGAGTAC GAGACGCTGC TGACCGACAA CCGGATCTGG
AAGCAGCGTC TGGTCGATAT CGGCGTGGTC AGCCCGGAGC GCGCGCTGCA GATGGGTTTC
ACCGGTCCGA TGCTGCGTGG TTCGGGCATT GCCTGGGACC TGCGCAAGAA GCAGCCGTAC
GAGGTGTACG ACAAGATGGA CTTCGATGTG CCGGTGGGCG TGGGCGGCGA CTGCTACGCG
CGCTACCTGG TCCGTGTCGA AGAGATGCGC CAGTCCAACC GCATCATCAA GCAGTGCATC
GAATGGCTGC GCCGTAATCC GGGCCCGGTG ATCACGGACA ACCACAAGGT TGCGCCGCCG
TCGCGGGTGG ACATGAAGTC GAACATGGAA GAACTGATCC ACCACTTCAA GCTGTTCACC
GAAGGCATGC ACGTGCCGGA AGGTGAAGCG TATGCAGCGG TGGAGCACCC GAAGGGTGAA
TTCGGTATCT ACGCGATCTC TGACGGCGCG AACAAGCCGT ACCGCCTGAA GATCCGCGCA
CCCGGCTTCC CCCACCTGGC CGCCCTCGAC GAGATGGCCA AGGGACACAT GATTGCTGAC
GCGGTAACGA TCATCGGCAC GCAAGACATC GTCTTCGGCG AGATCGACCG CTAA
|
|---|
| Protein sequence | MADIKNYTLN FGPQHPAAHG VLRLVLELDG EVIQRADPHI GLLHRATEKL AEQKSWIQNV
PYMDRLDYVS MMSNEHAYVM AIERLLGIEV PIRAQYIRVM FDEITRLLNH LMWIGAHALD
VGAMAVFLYA FREREDMFDM YEAVSGARMH AAYYRPGGVY RDLPDTMPQY RASKVHNERA
IKVMNEARSG SLLDFIEDFT NRFPKYVDEY ETLLTDNRIW KQRLVDIGVV SPERALQMGF
TGPMLRGSGI AWDLRKKQPY EVYDKMDFDV PVGVGGDCYA RYLVRVEEMR QSNRIIKQCI
EWLRRNPGPV ITDNHKVAPP SRVDMKSNME ELIHHFKLFT EGMHVPEGEA YAAVEHPKGE
FGIYAISDGA NKPYRLKIRA PGFPHLAALD EMAKGHMIAD AVTIIGTQDI VFGEIDR
|
|---|
| |