| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Reut_A0919 |
|---|
| Symbol | |
|---|
| ID | 3611312 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia eutropha JMP134 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007347 |
|---|
| Strand | - |
|---|
| Start bp | 999881 |
|---|
| End bp | 1001779 |
|---|
| Gene Length | 1899 bp |
|---|
| Protein Length | 632 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 637690310 |
|---|
| Product | helicase, C-terminal:DEAD/DEAH box helicase, N-terminal |
|---|
| Protein accession | YP_295142 |
|---|
| Protein GI | 73540622 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
|---|
| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCCAGC ACGACACTCG TGCGGAGCAA GCTATTGCCT CCGCCACCGA CGCTTCGATC
ACTTCCGCTG TCCAGAGCCC GCTCGACAAG CTCGACGCCA TGCTCAACCC CGCGCAAGTG
ACCGAGACCG TCGCGGCAGA GGAAGTCACC AACGGCTTTG CCACGCTTGG CCTGGATGCG
GCCATCCTGC GTGCCCTCTC CGAACTGAAC TACAACAACC CGACGCCCGT TCAGGCGCAG
GCCATTCCCG CCTTCCTGGC CGGCCGCGAC CTGCTGGTGT CGAGCCAGAC CGGCTCGGGC
AAGACGGCGG CGTTCATGCT GCCGGCAATC CAGCGCATCA GCGAAAAGCC CGCAACGAAC
CGCCCGACGG AACCGGCCAA GCGCATGAAG GGCAAGCGTC CCCGCCCGTC GCCGGCACAG
CCGTCACTGC TGGTGCTGAC GCCGACGCGC GAACTGGCGC TGCAGGTCAC CGAAGCCGCT
GCCAAGTATG GCCGCAACCT GCGCCGCATC GTGTGCGCGA GCATTCTGGG CGGCATGCCC
TACCCGAAGC AGCTGGCCGC GCTGTCCAAG ATGCCTGACA TCCTGGTGGC CACGCCGGGC
CGTCTGCTCG ACCATATCTC GGCCGGCCGC ATCGACCTGT CCGCACTCGA CATGCTCGTG
TTCGACGAAG CCGACCGCAT GCTGGACATG GGCTTTGCCG ATGACATCGA CGCGATCGTC
GACGCCACCC CGGCTAGCCG CCAGACGCTG ATGTTCTCCG CCACGCTCGA CGCACGCATC
GCCCAGCTCG CCTCGCGCCA GCTGAAGGAT CCGCAGCGCA TCGAGATCGC CGCGGCCCGC
GCCGACCAGA GCCATATCGA ACAGCGCCTG CACTTCACCG ACGACATGTC GCACAAGGAA
CGCCTGCTCG ACCACCTGCT GCGCGATGCC ACGCTCAAGC AAGCCATCGT GTTCACGGCC
ACCAAGCGTG ACGCCGACTC GCTGGCCGAA CGCCTGTCCG ATACCGGCTT TGCCGCCGGC
GCGCTTCACG GCGACATGAC CCAGGGCGCG CGCAACCGCA CCCTGACCGC ACTGCGCCGC
GGCAATCTGC GCGTGCTGGT CGCGACCGAC GTGGCCGCGC GCGGCATCGA CGTGCCCGAC
ATCACCCACG TGGTGAACTT CGACCTGCCC AAGCAGGCCG AGGACTATGT GCACCGTATC
GGCCGTACCG GCCGCGCCGG CCGCTCGGGC GTCGCGATCA ACCTGGTGAA CCACAACGAC
ACGTTCCAGT GGAAGCGCAT CGAGCGGTTC ACCAACAACC GCATCGACGC TTCGGTGATC
GAAGGCCTGG AGCCGCGCCG TTCGCCCAAG CCGCGCTCGA ACTTCGGCGG CAAGCCGGGC
GGCCGTGGCA ATGGTGGCGG CTACCGTGGC GGTGAGCGCA GCTTTGGCGA TCGCAACTTC
GGTGACCGCA AGTTCGGTGG CGAAAGCCGT GGCTTCGGTA ACCGTGGCAA CCAGGAAGGT
GGTCGCAGCT TCGGTGATGA CAACCGTGGC TTTGGCAACC GTGAAGGCAG CGGCTACCGT
GGCGGCGAGC AACGCAGCTT CGGCGGCGGC GACCGCAACT TCGGTGGCGA GCGCAAGTTC
GGCGGCGACA ATCGCGGCTT TGGCCAGCGC GCCAACCCCG AAGGCGGCCG CAGCTTCGGT
GACGACAACC GTGGCTTCGG CAACCGTGAA GGCGGCGGCT ACCGTGGCGG CGAGCAACGC
AGCTTCGGCG ACCGCAGCTT TGGTGACCGC AAGGTCGGTG GCGAAGGCCG CAGCTTCGGC
GACCGCGGCG GCCGTGATGG CGGCCGCAGC CTCGGCAACC GTGAAGGTGG CTTCGGCGGC
CAACGCAACG GCAACAGCCG TTCGCGCTAC GAGCGTTAA
|
|---|
| Protein sequence | MTQHDTRAEQ AIASATDASI TSAVQSPLDK LDAMLNPAQV TETVAAEEVT NGFATLGLDA
AILRALSELN YNNPTPVQAQ AIPAFLAGRD LLVSSQTGSG KTAAFMLPAI QRISEKPATN
RPTEPAKRMK GKRPRPSPAQ PSLLVLTPTR ELALQVTEAA AKYGRNLRRI VCASILGGMP
YPKQLAALSK MPDILVATPG RLLDHISAGR IDLSALDMLV FDEADRMLDM GFADDIDAIV
DATPASRQTL MFSATLDARI AQLASRQLKD PQRIEIAAAR ADQSHIEQRL HFTDDMSHKE
RLLDHLLRDA TLKQAIVFTA TKRDADSLAE RLSDTGFAAG ALHGDMTQGA RNRTLTALRR
GNLRVLVATD VAARGIDVPD ITHVVNFDLP KQAEDYVHRI GRTGRAGRSG VAINLVNHND
TFQWKRIERF TNNRIDASVI EGLEPRRSPK PRSNFGGKPG GRGNGGGYRG GERSFGDRNF
GDRKFGGESR GFGNRGNQEG GRSFGDDNRG FGNREGSGYR GGEQRSFGGG DRNFGGERKF
GGDNRGFGQR ANPEGGRSFG DDNRGFGNRE GGGYRGGEQR SFGDRSFGDR KVGGEGRSFG
DRGGRDGGRS LGNREGGFGG QRNGNSRSRY ER
|
|---|
| |