Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Reut_A0777 |
Symbol | |
ID | 3609957 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia eutropha JMP134 |
Kingdom | Bacteria |
Replicon accession | NC_007347 |
Strand | - |
Start bp | 847612 |
End bp | 848169 |
Gene Length | 558 bp |
Protein Length | 185 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637690167 |
Product | putative type 4 fimbrial pilin related transmembrane protein |
Protein accession | YP_295001 |
Protein GI | 73540481 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG4970] Tfp pilus assembly protein FimT |
TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCCGCAAT CAGCACTTCA CCGCAAGCAT GGCTTCACGC TGGCAGAGCT GCTGGTCTGC TTGTCGATCA TCGCCGTGCT GGCGGTGGCC GCCTGTCAGG CCGTCGACGT GCTGACGGCT AGCCATCAGG TAGCCGTCGC CGCGGACAGG CTGGCAGCTT CGCTGGCACA GGCGCGCAGC ACGGCCATGG CACGGCGGGC CGAAGTTGCC CTGCAACCGC TCGACGGCAA CACCACGCTG GACCAAGGCT GGCAACTCGT GGCCACAACC GGGGACCGCC AAACCGGGCA GAGTGCCATC GCCATGTCCG TGGTCCAACT CGGCGCCCCC TGCCTCGCCG TCTCCCTGCG CCAGACCGCA CGCGCCAGCA ACATCCTGCG ATTCACAGCT GTGGGATACT CTCGGTCTGA GCAAGGCGGA TTTCAGGCCG CCACTTTCAC GCTCAGCTGC CGCGGCGAGC AGCGCCAGGT CCGCATGGGA GCGCAAGGAC GGATCCGCCT TTGCACGCCC GGGCATGACA AGGACTGCGA GGCATCGGGC GAACCTGCCC CGCCCTGA
|
Protein sequence | MPQSALHRKH GFTLAELLVC LSIIAVLAVA ACQAVDVLTA SHQVAVAADR LAASLAQARS TAMARRAEVA LQPLDGNTTL DQGWQLVATT GDRQTGQSAI AMSVVQLGAP CLAVSLRQTA RASNILRFTA VGYSRSEQGG FQAATFTLSC RGEQRQVRMG AQGRIRLCTP GHDKDCEASG EPAPP
|
| |