Gene Reut_A0753 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagReut_A0753 
Symbol 
ID3609434 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia eutropha JMP134 
KingdomBacteria 
Replicon accessionNC_007347 
Strand
Start bp816469 
End bp817581 
Gene Length1113 bp 
Protein Length370 aa 
Translation table11 
GC content67% 
IMG OID637690142 
Productsecretion protein HlyD 
Protein accessionYP_294977 
Protein GI73540457 
COG category[V] Defense mechanisms 
COG ID[COG1566] Multidrug resistance efflux pump 
TIGRFAM ID[TIGR01730] RND family efflux transporter, MFP subunit 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGCGAA ACAAGAAGAT CCTGATCGCC GTGCTTGGAG CCGTGGCGGT GCTGAGCGCA 
ACGGCCGCCG TGCGCAAGGT CAGCAGCGCG CGCCAGGCAC CCACGCAGAC CGCGGCGCCT
TCGGTGGTGG AGTTCCTCCA GTCCGACCTG GTACAGGCCG GTGCACAGGA CCTGCGGGTG
GCACTGCCGC TGTCGGGCAG CCTGCGCGCA CTGAACCAGG CTTCGGTCAA GGCCAAGGTC
TCTGGCGAAG TGCTGCAGGT GCTCGTGCGC GAAGGCGAAG CCGTGCGGGC CGGCCAGGTG
ATCGTGCGCA TCGATCCGAC CGAATACGAG GCCAAAGTTG CGCAGGCCCG TGGCCAGATG
CTGGCGGCAC GCGGGCAATA CGAGAATTCG CGCCAGACCT GGGAGCGCAA CCGCGAACTG
GTCGGCAAGG GCTTTATCTC GAAGACCGCG TTCGACAACT ACCAGTCCAA CCTGGATGTG
GCCCGCGCCA ACCTCGATGC CGCGCAAGGC GGCCTGGCTG TCGCGCAGAA GGCGTTGAAC
GACACCGTGG TCAAGGCGCC GCTCGACGGC ATGGTGGCCG CGCGCGCTGT GCAGCCTGGC
GAGAAGGTAT CGCCCGACAC GCGCCTGATC GACGTGGTCG ATTTGCGCGT ACTGGAACTG
GAAGCCCCGG TGCCGATGGC CGACGTGGCG CGCGCATCGG TGGGCCAGTC CGTACAGCTC
GATGTGGAAG GCGCCGGGCA GTTTGCCGGC GCTCTCGTGC GCATCAACCC GGCCGTGAGC
CAGGGGACGC GCAGCATCAT GGTCTATGTG CGCGTGCAGA ACGACGACGG CAAGCTGCGT
GCCGGTATGT TCGCGCGGGG CGCGCTGGTG CTAGGCCAGC GCAGCGGTGT GGTGTCGGTG
CCGGCTTCAG CGGTGCGCAG CGACGGCGAA CGTGCTTTCG TCTATGTCAT CGAGAACGGC
GTCCTCGCCG AGCGCGCGGT GCAGACCGGC GTTCGCGATG AAGGCAGCGG CATGGTGGAA
ATCGTCTCGG GACTGACAAC CGGTACCGAG GTCGTGCGCA ACAACCTCGG CACGCTGCGC
AGCGGCAGCC AGGTGCGCCG CGTGAAGGCC TGA
 
Protein sequence
MKRNKKILIA VLGAVAVLSA TAAVRKVSSA RQAPTQTAAP SVVEFLQSDL VQAGAQDLRV 
ALPLSGSLRA LNQASVKAKV SGEVLQVLVR EGEAVRAGQV IVRIDPTEYE AKVAQARGQM
LAARGQYENS RQTWERNREL VGKGFISKTA FDNYQSNLDV ARANLDAAQG GLAVAQKALN
DTVVKAPLDG MVAARAVQPG EKVSPDTRLI DVVDLRVLEL EAPVPMADVA RASVGQSVQL
DVEGAGQFAG ALVRINPAVS QGTRSIMVYV RVQNDDGKLR AGMFARGALV LGQRSGVVSV
PASAVRSDGE RAFVYVIENG VLAERAVQTG VRDEGSGMVE IVSGLTTGTE VVRNNLGTLR
SGSQVRRVKA