| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Reut_A0689 |
|---|
| Symbol | |
|---|
| ID | 3610388 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia eutropha JMP134 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007347 |
|---|
| Strand | + |
|---|
| Start bp | 741837 |
|---|
| End bp | 744107 |
|---|
| Gene Length | 2271 bp |
|---|
| Protein Length | 756 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637690080 |
|---|
| Product | ornithine decarboxylase |
|---|
| Protein accession | YP_294915 |
|---|
| Protein GI | 73540395 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1982] Arginine/lysine/ornithine decarboxylases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.9866 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAATTCC GCTTCCCCGT CATCATCATT GACGAAGACT TCCGCTCCGA GAACATCTCC
GGCTCGGGTA TCCGCGCGCT GGCCGAGGCG ATCGAGAAAG AGGGGATGGA GGTCATGGGC
CTGACCAGCT ACGGCGACCT GACCTCGTTC GCGCAGCAGT CCAGCCGCGC TTCGACCTTT
ATCGTGTCGA TCGACGACGA CGAGTTCGTG ACCGCCGATG ACCAGCCCGA AGCGGCCGCC
ATCGAAAAGC TGCGCGCATT CGTCAATGAA GTGCGCCGCC GCAACACCGA CCTGCCGATC
TTCCTGTACG GCGAGACCCG CACCTCGCGC CATATCCCGA ACGATATCCT GCGCGAGCTG
CACGGCTTCA TCCACATGTT CGAGGACACG CCCGAGTTCG TGGCGCGCCA CATCATCCGC
GAAGCCAAGG TCTACCTCGA CACGCTCGCG CCGCCGTTCT TCAAGGCGCT GATCGACTAC
GCGCAGGATT CGTCGTACTC GTGGCACTGC CCGGGACACT CGGGCGGCGT GGCGTTCCTG
AAGAGCCCGG TGGGCCAGGT GTTCCACCAG TTCTTCGGCG AAAACATGCT GCGTGCCGAT
GTCTGCAACG CGGTGGATGA ACTCGGCCAG CTGCTGGACC ACACCGGCCC GGTGGCCGCG
TCCGAGCGCA ACGCCGCGCG TATCTTCAAC TCGGACCACA TGTTCTTCGT GACCAACGGC
ACGTCGACGT CGAACAAGAT GGTGTGGCAC GCCAACGTGG CGCCCGGCGA CATCGTCGTG
GTGGACCGCA ACTGCCACAA GTCGATCCTG CACGCGATCA TGATGACCGG CGCGATCCCC
GTGTTCCTGA TGCCGACGCG CAACCACTAC GGCATCATCG GCCCGATCCC CAAGAGCGAG
TTCGACCCGG AGACCATCCG CAGGAAGATC GCCAACCACC CGTTCGCAAG CAAGGCCAAG
AACCAGAAGC CGCGCATCCT GACGATCACG CAGGGTACCT ACGACGGCGT GCTGTACAAC
GCCGAGCAGA TCAAGGAGAT GCTCGCGTCG GAAATCGACA CGCTGCATTT CGATGAAGCG
TGGCTGCCGC ACGCGGCGTT CCACGAGTTC TATCACAACA TGCACGCGAT CGGCCGTGAC
CGCCCGCGCA GCAAGGACGC GCTGGTGTTT GCCACGCAGT CCACGCACAA GCTGCTGGCG
GGCCTGTCGC AGGCGTCGCA GATCCTCGTG CAGGATTCCG AAACGCGCAA GCTGGACCGC
TATCGCTTCA ACGAGGCGTA CCTGATGCAC ACCTCGACCA GTCCGCAGTA CGCGATCATC
GCCTCGTGCG ATGTCGCCGC GGCCATGATG GAAGCGCCGG GCGGCCCCGC GCTGGTGGAA
GAAAGCATCC AGGAAGCACT GGACTTCCGC CGCGCCATGC GCAAGGTCGA AGGCGACTTC
GAAGCCGGCA ACAATGGCGA CTGGTGGTTC AAGGTCTGGG GCCCGGATAC GCTGAACGAC
GAAGGCATGC CCGAACGCGA GCAGTGGATG CTCAAGGCCA ACGAGCGCTG GCACGGCTTC
GGCGACCTGG CCGACGGCTT CAACCTGCTC GACCCGATCA AGGCGACGAT CATCACCCCG
GGCCTGGACG TGGACGGCGA GTTCAGCGAT CGCGGCATTC CGGCGGCCAT CGTCACCAAG
TACCTGGCCG AGCACGGCAT CATCATCGAG AAGACGGGCC TGTACTCGTT CTTCATCATG
TTCACCATCG GCATTACCAA GGGCCGCTGG AATTCGCTGG TGACCGAGTT GCAGCAGTTC
AAGGACGACT ACGACCAGAA CCAGCCGCTG TGGCGCGTGC TGCCCGAGTT CGTTGGCAAG
CATCCACAGT ACGAACGCAT GGGCCTGCGT GACCTGTGCG ATGCCGTGCA CAGCGTCTAC
AAGGCCAACG ACGTGGCGCG CGTGACGACA GAGATGTACC TGTCGGACAT GGAACCGGCG
ATGAAGCCGT CAGACGCGTG GTCGATGATG GCGCACCGCG AGATCGAGCG CGTGCCGGTG
GACGACCTGG AGGGCCGAGT CACCGCCATC CTGCTGACGC CGTACCCGCC GGGCATCCCG
CTGCTGATCC CGGGCGAGCG CTTCAACCGC ACCATCGTCC AGTACCTGAA GTTCGCGCGC
GAGTTCAACA AGCTGTTCCC GGGCTTCGAG ACCGATGTGC ACGGGCTGGT CGAGGAAGAG
GTCGATGGCC GCAAGGCGTA CTTCGTGGAT TGCGTAAAGC AGGGCAGCTA A
|
|---|
| Protein sequence | MKFRFPVIII DEDFRSENIS GSGIRALAEA IEKEGMEVMG LTSYGDLTSF AQQSSRASTF
IVSIDDDEFV TADDQPEAAA IEKLRAFVNE VRRRNTDLPI FLYGETRTSR HIPNDILREL
HGFIHMFEDT PEFVARHIIR EAKVYLDTLA PPFFKALIDY AQDSSYSWHC PGHSGGVAFL
KSPVGQVFHQ FFGENMLRAD VCNAVDELGQ LLDHTGPVAA SERNAARIFN SDHMFFVTNG
TSTSNKMVWH ANVAPGDIVV VDRNCHKSIL HAIMMTGAIP VFLMPTRNHY GIIGPIPKSE
FDPETIRRKI ANHPFASKAK NQKPRILTIT QGTYDGVLYN AEQIKEMLAS EIDTLHFDEA
WLPHAAFHEF YHNMHAIGRD RPRSKDALVF ATQSTHKLLA GLSQASQILV QDSETRKLDR
YRFNEAYLMH TSTSPQYAII ASCDVAAAMM EAPGGPALVE ESIQEALDFR RAMRKVEGDF
EAGNNGDWWF KVWGPDTLND EGMPEREQWM LKANERWHGF GDLADGFNLL DPIKATIITP
GLDVDGEFSD RGIPAAIVTK YLAEHGIIIE KTGLYSFFIM FTIGITKGRW NSLVTELQQF
KDDYDQNQPL WRVLPEFVGK HPQYERMGLR DLCDAVHSVY KANDVARVTT EMYLSDMEPA
MKPSDAWSMM AHREIERVPV DDLEGRVTAI LLTPYPPGIP LLIPGERFNR TIVQYLKFAR
EFNKLFPGFE TDVHGLVEEE VDGRKAYFVD CVKQGS
|
|---|
| |