| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Reut_A0570 |
|---|
| Symbol | |
|---|
| ID | 3610833 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia eutropha JMP134 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007347 |
|---|
| Strand | - |
|---|
| Start bp | 617573 |
|---|
| End bp | 620884 |
|---|
| Gene Length | 3312 bp |
|---|
| Protein Length | 1103 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637689961 |
|---|
| Product | acriflavin resistance protein |
|---|
| Protein accession | YP_294796 |
|---|
| Protein GI | 73540276 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG0841] Cation/multidrug efflux pump |
|---|
| TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.231767 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACCTGT CCGCCACCTT CATCCACCGG CCGGTCGCGA CGGCGCTGCT CACCATCGGC
ATCTTGCTGG CGGGCCTGGC GGCGCTGCGG CTGCTGCCGG TGTCGCCGCT GCCGCAGGTG
GATTTCCCGA CCATTTCGGT CTCGGCATCG CTGCCCGGCG CTAGCCCCGA GACCATGGCC
GCCACGGTGG CCACGCCGCT GGAACGCGCG TTGGGCACCA TCGCGGGCGT GACGGAAATC
ACGTCGAGCA GCTCGCTCGG CTCGACCCGC GTGACGCTGC AGTTCGACCT GTCGCGCGAC
ATCGACGGCG CCGCGCGCGA TGTGCAGGCG GCCATCAATG CGTCGCGCGC GACGCTGCCG
ACCAGCCTGC CGAACAACCC GACTTACCGC AAGGTGAACC CGGCCGACGC GCCGATCATG
ATCATTGCGC TGACGTCGCC GACCATGACG CGTGGACAGC TCTATGACGC GGCGTCGACC
ATCCTTTCGC AGAAGCTGTC GCAGGTGGAA GGCGTTGGCC AGGTAACGAT TGGCGGTTCG
TCGTTGCCGG CGGTGCGCGT CGAACTGAAC CCGACGGCGC TGAACAAGTA CGGCATCTCG
CTCGAGGATG TGCGCAATAC CATCAGCGCC ACCAACGCCA ACCGGCCGCT GGGCACGGTC
GAGAACCGCA CGAACAACTG GCAGGTCTAC GCCAACGACC AGGCGATGAA GGCGAGCGAC
TACATGCCGC TGATCATCCG CTACGCCACG CCGGGCACGT TCTCGTCGGC ATCGGCCGGC
GCGCTGATCG CCAGCACCGC GAATGCGACC GCAGTGGGCG GCGTGAGCAC CAAGGTCGTC
AACGGTGTGA CCGTGACCAC CATCACGACC AGCAGCGGCA CGACCACCGT CACCAGTGGC
GCCACGGGCG GCAACAACAC GACGAGCGGT CCCAATTCCT TCGCCGTGCC CGTGCGCCTG
CAGGACGTGG CAAGCGTCGT CGACTCGGTG CAGGACATCC GCAACGCGGG CTCCGCCAAC
GGCAAGCCGT CCGTGCTGCT GGTGCTCAAC CGCTCGCCGG GCGCGAACAT CATCGAGACC
GTCGACCGCG TGCGCGACAT GCTGCCAACG CTGCAGAAGA TGATCCCCGG GGCCATCTCG
ATGGAAGTGA TGATGGACCG CACGCCGACC ATCCGTGCGT CGCTGCGTGA AGTCGAGCAC
ACGCTGATGA TCTCGGTGGC GTTGGTGATC ATGGTGGTGT TCCTGTTCCT GCGCAATGTG
CGCGCGACGT TCATCCCCAG CGTGGCAGTG CCGGTTTCGC TGATCGGCAC GTTCGGGGTC
ATGTACCTGG CGGGGTTCTC GCTGAACAAC CTGTCGCTGA TGGCGCTGAC GATTGCCACC
GGCTTCGTGG TGGACGATGC GATCGTGGTG CTCGAGAACA TCTCGCGCCA TATCGAGGAA
GGCATGAAGC CGCTGGCCGC CGCGCTGCGC GGTGCCCGTG AAGTCGGCTT CACGGTGCTG
TCGATGAGCC TGTCGCTGAT CGCGGTGTTC ATTCCGCTGC TGATGATGGG CGGCATTGTC
GGACGCCTGT TCCAGGAATT CGCGATCACG CTGTCGGTGT CGATCCTGGT TTCGCTGGTA
GTGTCGCTGA CGACCACGCC GATGATGTGC GCACGCCTGC TGCGCACGCC TGTGCCCGAG
GAAGAACGGG GCCGCTTCTT CCGCGCGAGC GAACACGTGT TCCGCTGGCT GCATGACAGC
TACGCACGCA CGCTGGCCGT CGCGTTGCGC TACAGCGCGG TCGTGTGGCT GGTCCTGCTG
GCCACCGTGG CACTCAATGT GTGGCTCTAC GTGATCGTGC CGAAGGGCTT CTTCCCGCAG
CAGGACACGG GCCGGCTGAT CGGCTTTATC CGCGCGGACC AGGCTACCTC GTTCCAGGCC
ATGCAGCCCA AGCTGGACAA CTTCATCCGG ATCGTCCAGT CAGATCCGGC GGTGGAGAAC
GTCACCGGAT TCACCGGCGG TTCGCAGCGC AATACCGGCC AGATGTTCGT CACGCTCAAG
CCGCTGTCGC AACGCAAGGA AAGCGCCGAC GCCATCATTG CGCGATTGCG CGTCAAGCTG
TCCAAGGAGC CGGGCGCCAA CCTGTTCCTG CAGGCCGTAC AGGACATCCG TGTCGGCGGT
CGGCAGAGCA GTTCGCAATA CCAGTTCACC CTGCAGTCCG ACGACCTGCA GGTGCTGCGC
GACTGGGAGC CGAAGGTGCG CGCAGCGATC TCCAACATCA AGGGCATCGA AGACGTCGAC
ACCGACACCA ACGACAAGGG CCTGCAGACC TCGGTCATCA TCGACCGCGA CGCGGCATCG
CGCCTCGGCG TGACGGCGCA GCAGGTCGAC GCCGTGCTCA ACGACGCGTT CGGCCAGCGC
CTGGTATCGA CCATCTACAA CCCGCTCAAC CAGTACCGCG TCGTCATGGA GCTGAGCCAG
GAGTACCTGC AGGGACCGCA AGCGCTGCAC GATATCTACG TGGTCACGGG CAACGGCCGC
CGCGTGCCGC TGTCCGCGTT CGCCTCGGTG ATGCCTACCA GTACGCCTCT GGGCGTGAAC
CACCAGGGCC AGTTCGCGGC GTCGACGATC TCGTTCAACC TTGCAGAAGG CTTCTCGCTG
TCGCAGGCCA CCGATGCGAT CAAGCGCGCC ATGGCGCAGA TCGGCGCGCC CGAGACGCTG
CAGGCGAACT TCCAGGGCGG CGCCAAGGCG TTCCAGGACT CGCTAAAGAG CCAGCCGATC
CTGATTCTCG CTGCGATCAT CACGATCTAC ATCGTGCTCG GCGTGCTGTA CGAAAGCTAC
GTCCATCCGC TGACGATCCT GTCCACGCTG CCCTCGGCGG GCGTGGGCGC GCTGCTGGCG
CTGCTCGCGT TCAAGACGGA GTTCAGCATC ATCGCGCTGA TCGGCGTGAT CCTGCTGATC
GGCATCGTGA AGAAGAACGC GATCATGATG ATCGACTTCG CGATCGATGC GGAGCGGCGC
GAAGGCCTGT CCCCGCGCGA TGCCATCCAC CGCGCCTGCC TGCTGCGCTT CCGCCCGATC
CTGATGACGA CCATGGCGGC GCTGCTGGGC GCGATACCGC TGGCCATCGG CCGTGGCGAC
GGTGCCGAGC TGCGCGCGCC GCTGGGCATC TCGATCGTGG GCGGGCTGGT GGTGAGCCAA
CTGCTGACCC TGTACACCAC GCCGGTGGTC TACCTGACGC TGGATCGCTG GCGCCTGAAA
GTGAAGGCCT GGCGCGAACG CCGCCGCGGC AACCCGCACG GCTCCGCACC GGCTGCCGGC
ACCGAATCCT GA
|
|---|
| Protein sequence | MNLSATFIHR PVATALLTIG ILLAGLAALR LLPVSPLPQV DFPTISVSAS LPGASPETMA
ATVATPLERA LGTIAGVTEI TSSSSLGSTR VTLQFDLSRD IDGAARDVQA AINASRATLP
TSLPNNPTYR KVNPADAPIM IIALTSPTMT RGQLYDAAST ILSQKLSQVE GVGQVTIGGS
SLPAVRVELN PTALNKYGIS LEDVRNTISA TNANRPLGTV ENRTNNWQVY ANDQAMKASD
YMPLIIRYAT PGTFSSASAG ALIASTANAT AVGGVSTKVV NGVTVTTITT SSGTTTVTSG
ATGGNNTTSG PNSFAVPVRL QDVASVVDSV QDIRNAGSAN GKPSVLLVLN RSPGANIIET
VDRVRDMLPT LQKMIPGAIS MEVMMDRTPT IRASLREVEH TLMISVALVI MVVFLFLRNV
RATFIPSVAV PVSLIGTFGV MYLAGFSLNN LSLMALTIAT GFVVDDAIVV LENISRHIEE
GMKPLAAALR GAREVGFTVL SMSLSLIAVF IPLLMMGGIV GRLFQEFAIT LSVSILVSLV
VSLTTTPMMC ARLLRTPVPE EERGRFFRAS EHVFRWLHDS YARTLAVALR YSAVVWLVLL
ATVALNVWLY VIVPKGFFPQ QDTGRLIGFI RADQATSFQA MQPKLDNFIR IVQSDPAVEN
VTGFTGGSQR NTGQMFVTLK PLSQRKESAD AIIARLRVKL SKEPGANLFL QAVQDIRVGG
RQSSSQYQFT LQSDDLQVLR DWEPKVRAAI SNIKGIEDVD TDTNDKGLQT SVIIDRDAAS
RLGVTAQQVD AVLNDAFGQR LVSTIYNPLN QYRVVMELSQ EYLQGPQALH DIYVVTGNGR
RVPLSAFASV MPTSTPLGVN HQGQFAASTI SFNLAEGFSL SQATDAIKRA MAQIGAPETL
QANFQGGAKA FQDSLKSQPI LILAAIITIY IVLGVLYESY VHPLTILSTL PSAGVGALLA
LLAFKTEFSI IALIGVILLI GIVKKNAIMM IDFAIDAERR EGLSPRDAIH RACLLRFRPI
LMTTMAALLG AIPLAIGRGD GAELRAPLGI SIVGGLVVSQ LLTLYTTPVV YLTLDRWRLK
VKAWRERRRG NPHGSAPAAG TES
|
|---|
| |