Gene Reut_A0545 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagReut_A0545 
Symbol 
ID3611093 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia eutropha JMP134 
KingdomBacteria 
Replicon accessionNC_007347 
Strand
Start bp591012 
End bp592034 
Gene Length1023 bp 
Protein Length340 aa 
Translation table11 
GC content68% 
IMG OID637689936 
Productlipopolysaccharide heptosyltransferase II 
Protein accessionYP_294771 
Protein GI73540251 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0859] ADP-heptose:LPS heptosyltransferase 
TIGRFAM ID[TIGR02195] lipopolysaccharide heptosyltransferase II 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0086605 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAAG CCCTCGTCAT CGCCCCTGAC CGGATCAGCG ACGCCCTGAT GGCCCAGCCG 
CTGCTCGGGC TGCTCAAGGC GCGCCATCCG CGGCTGGTCA TCGACGCCCT TGCACCCAAA
TGGGTCGGCC CGGTGCTGGC GCGCATGCCG GAGATGGGCA GGGTCTTCCC GAGCGACCTG
ACGCACGGGA AGCTGCAGCT TTCGGCACGG TTCATGTTCG CCCAGCAGCT CAAGAACGAA
GGCTACGACA TGGCCTACGT GCTGCCGGAT TCGCTCAAGT CAGCGCTGAT TCCGTGGCTG
GCAGGCATTC CGCTGCGCGT CGGCTACCGC GGCGAGTCGC GCTTCGGCAT GCTGAACGTG
CGCCATGCCA ACCCGCCGCG CAACGGCCGC CCGGTCATGG CCGAGCATTA CGCGCGCCTG
GCGCTGCGGC CCGGCGCAAA GCCGCCGGCG GAATTGCCCG AACCGCGACT GCGCACCGAT
GCCGTCCGGA TCGCCGCCAC GGCCGAGCGC TTCGGTATCC CGCCGCAGAC GCGCGTGATC
GCGTTCTGCC CGGGCGCCGG CTTCGGCCCC GCCCGTCGCT GGCCTGCCGC GCATTTCGCG
AAGCTCGCAC AGATGCTGAG GCGCTCGTAC CCGTATGCCC AGATGATCAC GCTGGGCGCG
GCCGCCGATG CGGACGCCGC TGCGGAGATC ACGAGCGAAG CGCCGTTCGT GCGCAACCTG
TGCGGCAAGA CTTCGCTCGA CGATGCCATC GACCTGCTCG CGCTGTCCGA AGCGGCCGTA
TGCAACGACA CCGGCCTCAT GCACATCGCC GCGGCGCTGA ACCGCCCGCA AGTTGCGGTG
TTCGGCTCGA GCGATCCGCG CCAGACGCCG CCCCTGTCAC AGGCAGCGAG TATCATGTGG
CTGCAACTCG AATGCAGTCC GTGCCTCAAA CACGAGTGTC CCCTGGGACA CATGCGCTGC
CTGAAGGACA TCGAGCCCGA AATGGTGTTC GTTGAACTGC GCAAGCTGCT GCACCGGCCC
TGA
 
Protein sequence
MKKALVIAPD RISDALMAQP LLGLLKARHP RLVIDALAPK WVGPVLARMP EMGRVFPSDL 
THGKLQLSAR FMFAQQLKNE GYDMAYVLPD SLKSALIPWL AGIPLRVGYR GESRFGMLNV
RHANPPRNGR PVMAEHYARL ALRPGAKPPA ELPEPRLRTD AVRIAATAER FGIPPQTRVI
AFCPGAGFGP ARRWPAAHFA KLAQMLRRSY PYAQMITLGA AADADAAAEI TSEAPFVRNL
CGKTSLDDAI DLLALSEAAV CNDTGLMHIA AALNRPQVAV FGSSDPRQTP PLSQAASIMW
LQLECSPCLK HECPLGHMRC LKDIEPEMVF VELRKLLHRP