Gene Reut_A0541 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagReut_A0541 
Symbol 
ID3611089 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia eutropha JMP134 
KingdomBacteria 
Replicon accessionNC_007347 
Strand
Start bp587079 
End bp588800 
Gene Length1722 bp 
Protein Length573 aa 
Translation table11 
GC content68% 
IMG OID637689932 
Productpeptidase M48, Ste24p:tetratricopeptide TPR_4 
Protein accessionYP_294767 
Protein GI73540247 
COG category[R] General function prediction only 
COG ID[COG4783] Putative Zn-dependent protease, contains TPR repeats 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.864475 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCTGCCG GCCCGGCATC ACTTGGCCCC GCGCGGAATG CGGGGCCATG GCGCCGTTCG 
CTGGTTGCCG TGATCGCGCT GACCATGGTG ACGCCGGCGT GGCCGCAGGG AACAGCGCCC
GCTGCGCCAT CCGGCACCAC GGCCAAGGCG GCCACCGTGC CGGTGGAAAC TAGCGATCAG
GTCTACGACA ACCTGAGCCG CAGCGTGCGG GCAGGGCAGA AATCGGAGTT CGGGCTGCGC
ACCAACAATG CCGTTGTCGA TGCCGGCGGC GTGCAATTGC CCGATATGGG CGATCCGTCC
ACCGCGGCGC TGTCGCCCGA CATGGAAAAG CGCCTCGGCG ACCGCATCAT CCGTGACATC
CGGCGCGATC CGCAGTATGT GCCCGATCCG CTGCTGTCCG ACTATCTGAA TGCGTTGGGC
TACCGGCTGG TGCAGGCCGC ACGGCGGCAG AACATCTCCG GATCGACCGG TGCGGGGACT
TTCGCCACGG GTTTCGACCT CTTTGCCGTG CGTGACCGTA GCATCAACGC GTTCGCGTTG
CCGGGTGGCT ATATCGGCGT GCATACGGGC CTGCTGGTGC AGTCGGAGAC CGAATCCGAA
CTCGCGTCGG TGCTCGGCCA CGAAATCGGC CACGTGATGC AGCGCCATAT CGCACGCGGC
ATCACGCAGC AGGACCAGTC GATGTGGATC GCGCTGGCCT CGATGGTGCT GGCGGGCCTG
GCGGCCACGC GCAGTCCCGA TGCGGCGGCC GCGCTGGCGA TGGGCGGGCA GGGCGCGGCC
ATCGCCAACC AGCTTTCATT CTCGCGCGGG GCTGAGCGCG AGGCCGACCG GGTCGGCTTC
CAGATCATGA CCGCGGCTGG TTTCGATCCG CAGGGCATGC CGGATTTCTT CCAGCGGCTC
CAGCGGGCGT CGGGCACGGC GGAGAATTCG GTGCCGTCCT ACGTGCGGAC CCACCCGCTC
ACCTCCGAGC GGATTGCGGA CATGCAGGAT CGCGTCAGCC ACGTGTCGGC GCGCAAGGTG
CCCAATACGC CCGAATACGA GTTCGCGCGC GTGCGGGCAC GCGTGATCCA GGAAACCTCG
CCCAGCGAAC TGCAGAACCT GCGCGCGGCG ATACGTTCGC AACTGGCAAA TGCCTCGGCG
CTGCGCGCGC CGGCGCTGCA CTATGGCCTG GCCTTCGTCG AGCAGCGCCT CGGCCGCTAT
CCGGCGGCCG AGCAGGAACT GGCCGAAACG CGCCGGCTGT ACGGCAACAT TCCCGGGGCC
ACGTCGGGTA GCCCCATGCT CGATGTGATG GCGATCGAGC TCTCGCGCCA GCAGGGCCGC
GTGCCCGAAG CGATGAGCCA GGCCACGGCA TCGATGAAGG CGTTCCCGCT GTCGCACGCC
GTGGCGCTGG CCTATGCGGA TACGCTGCTC GGCACTGGCC AGTTCGACGC GGCGGTGACG
TTCCTGCGCG AACGCACACG GGAGGAAACC ACGCGCAGCG AGTGGTGGGA AATGCTGGCG
CGGGCCTATG CCGGACAGGG CAAGCGGGTG CAGCAGCACC AGGCACTGGC GGAAAAGTAT
GCGATGGACG GCGCCTACCA GGCCGCGATC GAACAGCTGC AGATCGCGCG CAAGGCCGGC
GATGGCGATT TCTACACGTT GTCCGAAGTC GATGCGCGCC TGCACCAGCT CCAGCGTCAG
TACCGCGAGG AAAAGCAGGA CAACAAGGGC ATGCCGAACT GA
 
Protein sequence
MPAGPASLGP ARNAGPWRRS LVAVIALTMV TPAWPQGTAP AAPSGTTAKA ATVPVETSDQ 
VYDNLSRSVR AGQKSEFGLR TNNAVVDAGG VQLPDMGDPS TAALSPDMEK RLGDRIIRDI
RRDPQYVPDP LLSDYLNALG YRLVQAARRQ NISGSTGAGT FATGFDLFAV RDRSINAFAL
PGGYIGVHTG LLVQSETESE LASVLGHEIG HVMQRHIARG ITQQDQSMWI ALASMVLAGL
AATRSPDAAA ALAMGGQGAA IANQLSFSRG AEREADRVGF QIMTAAGFDP QGMPDFFQRL
QRASGTAENS VPSYVRTHPL TSERIADMQD RVSHVSARKV PNTPEYEFAR VRARVIQETS
PSELQNLRAA IRSQLANASA LRAPALHYGL AFVEQRLGRY PAAEQELAET RRLYGNIPGA
TSGSPMLDVM AIELSRQQGR VPEAMSQATA SMKAFPLSHA VALAYADTLL GTGQFDAAVT
FLRERTREET TRSEWWEMLA RAYAGQGKRV QQHQALAEKY AMDGAYQAAI EQLQIARKAG
DGDFYTLSEV DARLHQLQRQ YREEKQDNKG MPN