| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Reut_A0523 |
|---|
| Symbol | |
|---|
| ID | 3611243 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia eutropha JMP134 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007347 |
|---|
| Strand | - |
|---|
| Start bp | 568706 |
|---|
| End bp | 570403 |
|---|
| Gene Length | 1698 bp |
|---|
| Protein Length | 565 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637689914 |
|---|
| Product | major facilitator transporter |
|---|
| Protein accession | YP_294749 |
|---|
| Protein GI | 73540229 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2814] Arabinose efflux permease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.0233357 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCAAACA CGCAAAACGT AGCGATGCCC GGCGGAGGCG CGCAGAACGC ACCGATGACA
ACCGAGGAGA AGAAGGTCAT TCTGGCCTCG TCGCTCGGCA CGGTGTTCGA GTGGTATGAC
TTTTACCTGT ACGGCTCGCT GGCGGCAGTG ATCGCCAAGC AGTTCTTCGC CGGCCTGGAC
CCGACCTCTG CGTTCATCTT CGCCCTGCTG GCATTCGCGG CAGGCTTCAT CGTGCGCCCG
TTCGGCGCGC TGGTGTTCGG CCGCCTCGGC GACATGATCG GCCGCAAGTA CACCTTCCTG
GTGACGATCC TGATCATGGG CCTGTCGACG TTCATCGTCG GGCTGCTCCC GGGCTACGCC
ACCATCGGCT GGGCCGCCCC GATCATCCTG ATCGCGCTGC GCATGCTGCA GGGCCTCGCG
CTCGGCGGCG AGTACGGCGG TGCCGCCACG TACGTGGCCG AGCATGCGCC GCACGGCAAA
CGCGGTTCCT ACACGGCCTG GATCCAGACC ACCGCGACGC TGGGCCTGTT CCTGTCGCTG
ATCGTGATCC TGCTGTGCCG CGAGCTGACC GGTGCCAACT TCGAAGCCTG GGGCTGGCGT
ATTCCGTTCC TGGTCTCGAT CCTGCTGCTG GCCATGTCGG TGTACATCCG CCTGTCGATG
AGCGAGTCGC CGGCGTTCCA GCGCATGAAG GCCGAGGGCA AGACCTCGAA GGCTCCGCTG
ACCGAAGCGT TCGGCCAGTG GCGCAACCTG AAGATCGTGA TCGTGGCGCT GGTGGGCCTG
ACCGCCGGCC AGGCCGTGGT CTGGTACACC GGCCAGTTCT ACTCGCTGTT CTTCCTGACG
CAGGTGCTCA AGGTCGATGC CAAGACGGCC AACCTGCTGA TCGCCGGCGC GCTGGTGATC
GGCACACCGT TCTTCCTGTT CTTCGGCTCG CTGTCGGACA AGATCGGCCG CAAGTGGATC
ATCATGCTGG GCTGCGCGCT CGCCGTGCTG ACCTACTTCC CGCTGTTCAA GGCCCTGACG
CACTATGCAA ACCCGGCGCT CGAGCGTGCG CAGCAAACCG CGCAGATCGT TGTCACCGCC
GACCCGAAGC AGTGCTCGTT CCAGGGCAGC CCGATCGCAC GTGAAATCGA CTTCCGCAGC
TCCTGCGATA TCGTCAAGCG TACGCTGGCC CAGGCATCGG CAAGCTATGA AGTGGTGCAG
GCTCCGGCCG GCACGGTCGC TTCGGTGAAG ATCGGCGACA AGGAGATCAA GGCGTTCGAC
GCTACCGTCA CGGGCGGCCA CAGCTTCGAC GATGCCAGCA AGAAGCAGAT CGCCGCGTTC
AAGAAGGAGG TCGGCGAGTC CATGGCCGCG GCAGGCTACC CGACCAAGGC TGATCCGGCG
CAGATGAACA CCATCATGGT GCTGGTGGTC CTGGTGATTC TGGTGATCTA TGTGACGATG
GTGTACGGGC CGATCGCCGC CATGCTGGTG GAAATGTTCC CGACGCGTAT CCGCTACTCG
TCGATGTCGC TGCCCTACCA TATCGGCAAC GGCTGGTTCG GCGGGCTGCT GCCTACCATC
TCGTTCGCGC TGGTCGCCCA GAACGGCAAC ATCTACTACG GCCTCTGGTA CCCGATCATC
ATCGCCGCCG TCACCTTCGT GGTCGGTGCC CTGTTCGTGC GTGAAACCAA GGACGTGGAC
ATCTACGCCC ACGACTGA
|
|---|
| Protein sequence | MANTQNVAMP GGGAQNAPMT TEEKKVILAS SLGTVFEWYD FYLYGSLAAV IAKQFFAGLD
PTSAFIFALL AFAAGFIVRP FGALVFGRLG DMIGRKYTFL VTILIMGLST FIVGLLPGYA
TIGWAAPIIL IALRMLQGLA LGGEYGGAAT YVAEHAPHGK RGSYTAWIQT TATLGLFLSL
IVILLCRELT GANFEAWGWR IPFLVSILLL AMSVYIRLSM SESPAFQRMK AEGKTSKAPL
TEAFGQWRNL KIVIVALVGL TAGQAVVWYT GQFYSLFFLT QVLKVDAKTA NLLIAGALVI
GTPFFLFFGS LSDKIGRKWI IMLGCALAVL TYFPLFKALT HYANPALERA QQTAQIVVTA
DPKQCSFQGS PIAREIDFRS SCDIVKRTLA QASASYEVVQ APAGTVASVK IGDKEIKAFD
ATVTGGHSFD DASKKQIAAF KKEVGESMAA AGYPTKADPA QMNTIMVLVV LVILVIYVTM
VYGPIAAMLV EMFPTRIRYS SMSLPYHIGN GWFGGLLPTI SFALVAQNGN IYYGLWYPII
IAAVTFVVGA LFVRETKDVD IYAHD
|
|---|
| |