| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Reut_A0517 |
|---|
| Symbol | |
|---|
| ID | 3611525 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia eutropha JMP134 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007347 |
|---|
| Strand | + |
|---|
| Start bp | 562619 |
|---|
| End bp | 564139 |
|---|
| Gene Length | 1521 bp |
|---|
| Protein Length | 506 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 637689907 |
|---|
| Product | helicase, C-terminal:Type III restriction enzyme, res subunit:DEAD/DEAH box helicase, N-terminal |
|---|
| Protein accession | YP_294743 |
|---|
| Protein GI | 73540223 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
|---|
| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.0847838 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCTTTCT CCGAACTCGG CTTGTCCGAC AAGCTTGTGC GGGCCGTGGC CGAACAGGGC
TACACCACCC CCACCCCCAT CCAGGCCCAG GCAATTCCCG CCATCCTCAA AGGTGGCGAC
CTGCTTGCCG GCGCGCAGAC CGGTACCGGC AAGACGGCAG GCTTTACGCT GCCGATGCTG
CAGCTGCTGT CCGAATCGGC GCCACAGCGC CAGGGCAAGC CGGCGGTGCG CGCACTGGTG
CTGACGCCGA CGCGTGAACT GGCCGCGCAG GTGGAAGAAA GCGTGCGCAA CTACGGCAAG
TACGTGCGGT TGCGCTCGAT GGTCATGTTC GGCGGCGTGG GCATCAACCC GCAGATCGAA
CAGCTGCGCC GTGGCGTGGA AATCGTCGTG GCAACGCCGG GCCGCCTGCT GGATCACGTG
TCCCAGCGCA CGATCGACCT TTCCAGCGTG GAACTGCTGG TACTCGATGA AGCCGACCGC
ATGCTCGACA TGGGCTTCAT CCACGACATC CGCAAGATCC TCAACGTCCT GCCGCCCAAG
CGTCAGAACC TGCTGTTCTC GGCAACGTTC TCGGATGATA TTCGCGCGCT GGCGGACCGC
CTGCTGAACA ACCCGGCATC GATCGAGGTC GCGCGCCGCA ACACCACGGC CGAAACCGTG
GCGCAGCGCG TCTACCCGGT GGACCGCGAA CGCAAGCGCG AACTGCTCGC CCACCTGGTG
CGCGAGCATG ACTGGCACCA GGTGCTGGTC TTCACGCGGA CCAAGCACGG CGCCAACCGG
CTCGCCGAGC AGTTGACCAA GGACGGCCTG TCCGCGCTGG CGATCCACGG CAACAAGAGC
CAGTCGGCGC GCACGCGCGC GCTGTCCGAG TTCAAGGCCG GCACGCTGCG GCTGCTGGTG
GCCACCGATA TCGCCGCGCG CGGCATCGAC ATCGACCAGT TGCCGCACGT GGTCAACTTC
GACCTGCCCA ACGTGCCGGA AGACTACGTG CACCGCATCG GCCGTACCGG CCGCGCCGGC
GCAGAGGGTG AGGCGATCTC GCTGGTCTGC GTGGACGAGC ATGGCCTGCT GCGCGACATC
GAACGCCTGA TCAAGCGCAA GCTCGAACAG ACGGTGCTGA CGGGCTTCGA AGTCGATCCG
ACCATCGCGG CGGAGCCGAT CCAGAAGGGT CGCCAGCAGC GAGGCGGCGG GCAGGGCGGT
GGACAAGGTG GTGGACGTGG CCGTGCGCAG GCAAAGCCTG CGGCGCCAGC GGCAGCCAAG
CCGTCGCAGG GCCAGCCGCG TCAGCGCCCG GCCCAGAACG CACCGCGTGG CGCCAGCCAG
GCCGGGGGCG AGGCAGCCCG TGGCCACGGC GGCGCAAACC GCAACGCCGG CCAGGCTCAG
CCGCGCAACC CGCAACGCAA CGGCGGCGGC CAGGCGCGGC CTGCTCAGGA CGCCACTGGC
GCCCCGGCGC GCAACAACAA CCGCCGCCCG GCCTCGCAGG CCGCACTGCT TGGCGGCGCG
CGGGCTAAGC CGGCGCGCTG A
|
|---|
| Protein sequence | MSFSELGLSD KLVRAVAEQG YTTPTPIQAQ AIPAILKGGD LLAGAQTGTG KTAGFTLPML
QLLSESAPQR QGKPAVRALV LTPTRELAAQ VEESVRNYGK YVRLRSMVMF GGVGINPQIE
QLRRGVEIVV ATPGRLLDHV SQRTIDLSSV ELLVLDEADR MLDMGFIHDI RKILNVLPPK
RQNLLFSATF SDDIRALADR LLNNPASIEV ARRNTTAETV AQRVYPVDRE RKRELLAHLV
REHDWHQVLV FTRTKHGANR LAEQLTKDGL SALAIHGNKS QSARTRALSE FKAGTLRLLV
ATDIAARGID IDQLPHVVNF DLPNVPEDYV HRIGRTGRAG AEGEAISLVC VDEHGLLRDI
ERLIKRKLEQ TVLTGFEVDP TIAAEPIQKG RQQRGGGQGG GQGGGRGRAQ AKPAAPAAAK
PSQGQPRQRP AQNAPRGASQ AGGEAARGHG GANRNAGQAQ PRNPQRNGGG QARPAQDATG
APARNNNRRP ASQAALLGGA RAKPAR
|
|---|
| |