| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Reut_A0489 |
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| Symbol | |
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| ID | 3611793 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia eutropha JMP134 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007347 |
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| Strand | - |
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| Start bp | 531695 |
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| End bp | 532765 |
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| Gene Length | 1071 bp |
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| Protein Length | 356 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637689879 |
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| Product | dihydrouridine synthase TIM-barrel protein nifR3 |
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| Protein accession | YP_294715 |
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| Protein GI | 73540195 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0042] tRNA-dihydrouridine synthase |
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| TIGRFAM ID | [TIGR00737] putative TIM-barrel protein, nifR3 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.636322 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCAGATAG GACCACACCA ACTTCGCAAC AACCTGTTCG TCGCCCCCAT GGCGGGTGTG
ACGGATCGCC CTTTCCGCCA GCTGTGCAAG CAGCTCGGGG CAGGCTACGC GGTGTCGGAG
ATGGTGGCGT CCAACGCACA GCTGTGGAAA AGCGAGAAGA CCATGCGCCG CGCGAACCAT
GCCGGCGAGG TCGAACCGAT CTCGGTGCAG ATCGCCGGCG CGGAGCCAGG CATGATGGCC
GAGGCTGCGC GCTACAACGT CGATCGCGGC GCGCAGATCA TCGATATCAA TATGGGCTGC
CCGGCCAAGA AGGTCTGCAA TGTGGCCGCG GGGTCCGCGC TGCTGCAGAA CGAGCCGCTG
GTGGTGCGCA TTGTCGAGGC CGTGGTCGCC GCCGTCGGCG ATCGCGTGCC GGTCACGCTC
AAGATCCGCA CCGGCTGGAA CCGCGAGAAC CGCAATGCGC TGCGCATTGC GCGCATGGTG
GAAGACGCGG GCATCAGCAT GCTGACCATC CACGGCCGCA CGCGCGCGGA CTTGTACCAC
GGCGATGCCG AGTACGAGAC CATCGCCGCG GTCAAGGCCG AGCTCCGTAT CCCGGTGGTA
GCCAACGGCG ACATCACCAC GCCGCAGAAG GCGAAGCAGG TGCTGGCGCT GACGGGCGCC
GACGCCATCA TGATCGGCCG CGCGGCGCAA GGCCGGCCTT GGCTGTTCCG TGAGATCGAG
CACTTCATGA AAACCGGCGA ACTGCTGCCG TCGCCCGAAG TGGCCGAGAT CCGCGCGATC
ATGAACGCGC ACCTCGAAGA CCACTATGCG TTCTATGGCG AGTTCACCGG CGTGCGCACC
GCGCGCAAGC ATATCGCGTG GTACACGCGC GGGCTGCGCG GCGCAAACCT GTTCCGCCAC
CGCATGAACA CGCTGGAAAG CACCGGCGAA CAACTGGCCG CGGTCAACGC CTTCTTCGAT
GAGCAGGCGC AATGGTCAGA CCGGCTCGTC TATGTCGATG AGGCAGATGC CGGCGGAGAA
GAAGCGAACA ACAACAACGA CAACGACAAA GGGGAGTTGC TTGCCGCATG A
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| Protein sequence | MQIGPHQLRN NLFVAPMAGV TDRPFRQLCK QLGAGYAVSE MVASNAQLWK SEKTMRRANH
AGEVEPISVQ IAGAEPGMMA EAARYNVDRG AQIIDINMGC PAKKVCNVAA GSALLQNEPL
VVRIVEAVVA AVGDRVPVTL KIRTGWNREN RNALRIARMV EDAGISMLTI HGRTRADLYH
GDAEYETIAA VKAELRIPVV ANGDITTPQK AKQVLALTGA DAIMIGRAAQ GRPWLFREIE
HFMKTGELLP SPEVAEIRAI MNAHLEDHYA FYGEFTGVRT ARKHIAWYTR GLRGANLFRH
RMNTLESTGE QLAAVNAFFD EQAQWSDRLV YVDEADAGGE EANNNNDNDK GELLAA
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