| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Reut_A0405 |
|---|
| Symbol | |
|---|
| ID | 3609413 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia eutropha JMP134 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007347 |
|---|
| Strand | + |
|---|
| Start bp | 442752 |
|---|
| End bp | 443963 |
|---|
| Gene Length | 1212 bp |
|---|
| Protein Length | 403 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 637689795 |
|---|
| Product | aspartate aminotransferase |
|---|
| Protein accession | YP_294631 |
|---|
| Protein GI | 73540111 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0436] Aspartate/tyrosine/aromatic aminotransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.152588 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCAGACA GCCCAAGCCG CCACTCGCCT GATCCGCAAC TTCCTCTCGC CCGGGACGCC
GTCCACAATC TGCGCGCGTC GCGCATCCGC GAAGTCGCGA ACGCCGGCAT CGGCCTGCCT
GAGGTGCTGC CGTTCTGGTT CGGCGAATCG GATCAGGTCA CGCCGGACTT CGTCCGCGAC
GCCGCGGCGC GTGCGCTGGC GGGTGGCGCC ACGTTCTATA CGCACAACCT CGGCATCGCG
CCCCTTCGCA GTGCGCTGGC CGACTATGTC GGCGCGCTGC ATGGCGCCAC GCGCATCGAG
AACGTCGCGG TCACGAGTGC CGGCGTCAAC GGCCTGATGC TGGCGGCCCA GCTCATTGCC
GGGCCTGGCG ATCGCGTGGT GGCGGTCACG CCACTATGGC CCAACCTGGT GGAGATCCCG
AAGATCCTCG GCGCCTCGGT CGAAACCGTT TCGCTCGACT ATGGTCCGCA CGGGTGGACG
CTCGATGTCG ACAAGCTGCT CGCGGCGCTG ACGCCGGACA CGCGTGCGCT GATGGTCAAT
TCGCCGAACA ACCCGACCGG CTGGGTGATG TCGCGCGCGG CACAACTTAC CGTGCTGGAC
CACTGCCGCC GGCACGGGAT CTGGATCATT GCCGACGAGG TCTATGAGCG GCTCTACTAC
GGCGATGAAC CCGGTGGGGG CGACAGCCGC ACCGCGCCGT CGTTCCTGGA CATCGCCTCG
CGCGAGGAGC GCGTCATCTG CGTCAACTCG TTTTCCAAGG CGTGGCTGAT GACGGGCTGG
CGGCTCGGCT GGATGGTGTT GCCTTCATCG ATGACCGACG ATCTCGGCAA GCTGATCGAA
TACAACACCT CGTGCGCGCC TTCGTTCGTG CAGGAGGCAG GCGTGGCAGC GGTGCGCGAA
GGCGAAGCGT TCACGCGCGA CCTCGTCCAG CGGTTGCGCA CGGCGCGCGA CCACCTCGTG
GATGCGCTGT CCGCCTTGCC CGGTGTGGAC GCGCATGCGC CGGAGGGCGC GATGTACGTG
TTCTTCCGCC TGTCCGGCGC CACGGACAGC CTGGCCCTGT GCAAGCAGCT CGTGCGGGAA
GCGGGTTTGG GGCTGGCACC GGGCAGCGCA TTCGGCGATG AAGGGGAGGG CTTCGTGCGC
TGGTGCTATG CGTGCGACAC GGATCGCCTC GATGAAGGCG TGCGGCGCCT GCGCGGGTTC
ATCGGGCGCT GA
|
|---|
| Protein sequence | MPDSPSRHSP DPQLPLARDA VHNLRASRIR EVANAGIGLP EVLPFWFGES DQVTPDFVRD
AAARALAGGA TFYTHNLGIA PLRSALADYV GALHGATRIE NVAVTSAGVN GLMLAAQLIA
GPGDRVVAVT PLWPNLVEIP KILGASVETV SLDYGPHGWT LDVDKLLAAL TPDTRALMVN
SPNNPTGWVM SRAAQLTVLD HCRRHGIWII ADEVYERLYY GDEPGGGDSR TAPSFLDIAS
REERVICVNS FSKAWLMTGW RLGWMVLPSS MTDDLGKLIE YNTSCAPSFV QEAGVAAVRE
GEAFTRDLVQ RLRTARDHLV DALSALPGVD AHAPEGAMYV FFRLSGATDS LALCKQLVRE
AGLGLAPGSA FGDEGEGFVR WCYACDTDRL DEGVRRLRGF IGR
|
|---|
| |