Gene Reut_A0402 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagReut_A0402 
Symbol 
ID3609410 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia eutropha JMP134 
KingdomBacteria 
Replicon accessionNC_007347 
Strand
Start bp437370 
End bp438410 
Gene Length1041 bp 
Protein Length346 aa 
Translation table11 
GC content66% 
IMG OID637689792 
Productputative type 4 fimbrial biogenesis pilw-related protein transmembrane 
Protein accessionYP_294628 
Protein GI73540108 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG4966] Tfp pilus assembly protein PilW 
TIGRFAM ID[TIGR02532] prepilin-type N-terminal cleavage/methylation domain 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGGCGG GGCACCGAAG CATCCTGCGC CGCCAGCGCG GCGTCTCGCT GGTCGAGCTG 
ATGATCGGCA TCACGCTGGG CCTGTTGCTG CTGACGGCGC TTGCGAGCCT CTACTACGCC
AACAGCATGT CGCGGTCCGA GCTCATCAAG TCGAGCGAGC AGATCGAGAA TGGCCGCTAT
GCGCTGGACC TGATCCGGCG TGATGCGGAG CTGGCGGGCT TCTTTGGTGC GGGCGGCATC
GCGAAGGGCG CCACGCCGAC CAATCCCCAG CCTGTGCCAT GCGCGACGTC GCCCGCGGCG
CTCGGCTTTT CCACATCGCC GTCCATCACG CTGCCGCTGG CCGTGACAGG GTTCGCGCCG
GGTACGGTCC TGCCATGCCT GCCGGATGTC ACTGCAGGAT CGGAGATCGT CGTGATGCGC
CGCGTTGCCA CGGTGACCTC GGCCGCGCCT GCGGCGGGCG TGCCGTACCT GCAGGTATCG
TCCTGCCCCG ACGACAGCGT GTCCTTTGTC TTCGACGCCA GCGCCCCGGC GTTCACCATG
CGGACCAAGG CGTGCGATCC GACCGTACCC GCGCCGTTGC GGCAAGCGGT GGTGCGCATC
TTCTACCTGT CCGCGTGCGA TTTGTGCAGC AATGGCGGCG ACGGCATTCC GACGCTCAAG
ATGGCGGAGC TCGTGAACGG CGCCTTCCAG AGCCAGTCGC TGGCGCAGGG CATTCAGGAT
ATGCACGTGA TCTACGGCAT GGATCTCGAC AACAACGGCT CCGCGGATTG CTATGTGGAC
GATCCGGGCG CCAACAATGC GGCGGCCTGC ACCAGTGTCC CCGGCTACGA CTGGAGCGTC
CCGCTGACCA ACTGGTCGAA CGTCACGACG ATGCGCGTGA GCGTGCTGGC GCGAACGCTG
CAGCAGTCCA TGGGCCAGGT CGACAACCGC ACCTATGACC TGGGCCGCGC CACGGCCAGC
GGTCCCTTCA ATGACGGCTA CAAGCGCCAC GTCTACTCGA CGGTTGCGCG GCTGGTCAAT
GTGGCCGGCA CACGGGAGTA A
 
Protein sequence
MMAGHRSILR RQRGVSLVEL MIGITLGLLL LTALASLYYA NSMSRSELIK SSEQIENGRY 
ALDLIRRDAE LAGFFGAGGI AKGATPTNPQ PVPCATSPAA LGFSTSPSIT LPLAVTGFAP
GTVLPCLPDV TAGSEIVVMR RVATVTSAAP AAGVPYLQVS SCPDDSVSFV FDASAPAFTM
RTKACDPTVP APLRQAVVRI FYLSACDLCS NGGDGIPTLK MAELVNGAFQ SQSLAQGIQD
MHVIYGMDLD NNGSADCYVD DPGANNAAAC TSVPGYDWSV PLTNWSNVTT MRVSVLARTL
QQSMGQVDNR TYDLGRATAS GPFNDGYKRH VYSTVARLVN VAGTRE