| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Reut_A0268 |
|---|
| Symbol | |
|---|
| ID | 3610124 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia eutropha JMP134 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007347 |
|---|
| Strand | - |
|---|
| Start bp | 297864 |
|---|
| End bp | 298841 |
|---|
| Gene Length | 978 bp |
|---|
| Protein Length | 325 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637689657 |
|---|
| Product | 2-nitropropane dioxygenase, NPD |
|---|
| Protein accession | YP_294494 |
|---|
| Protein GI | 73539974 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2070] Dioxygenases related to 2-nitropropane dioxygenase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCCGCCG CAAGACAACT GCCTCAGGCG CTCCAAAACC TGGCTCTTCC CGTCATCGCC
TCGCCGATGT TTATCGTCAG CTATCCGGAA CTGGTGCTGG CGCAGTGCAA GGCTGGCATC
GTCGGTTCGT TCCCGGCGCT GAATGCGCGC CCGGCGGAGC TGCTCGACGA ATGGCTCACG
CAGATGCAGG AGGAGCTGGC CAGCTTCCAG GCCGCCAATC CGGGCAAGCC GGTCGGCCCG
ATCGCGGTGA ACCAGATCGT GCATACGTCC AACGCGCGCC TTGAACACGA CGTGAAGGTC
TGCGTGGACC ACAAGGTGCC GATCTTCATC ACGTCGCTGC GCGCGCCGGT CAGGGAGATG
ATCGACGCCG TGCACAGCTA CGGAGGCATC GTGCTGCATG ACGTGATCAA CCTGCGCCAT
GCCGAGAAAG CGCTCGAAGC GGGTGTCGAC GGGTTGATCC TGGTCGCCGC CGGCGCGGGC
GGCCATGCCG GCATGCTGTC GCCGTTCGCG CTGGTTGGCG AGGTGCGCAA GATCTTCGAC
GGCCCGATTG CGCTGTCAGG GTCGATCGCC ACCGGTGACG CCGTGCTGGC GGCGCAGGCC
ATGGGCGCTG ACTTTGCCTA CGTGGGCACG CGCTTCATTG CCTCGCAGGA AGCGCACGCG
AACGAAGCGT ACAAGCAGTC GATCACCGAT TCGGCCGCCG CCGACATCAT CTACACCAAC
CTGTTCACGG GCGTACACGG CAACTACATC CGCGAGAGCA TCGTCGGTGC CGGCCTCGAT
CCGGAGAACC TGCCTGTGGC CGACAAGACC AAGATGGACT TTTCCAGCGG CAGCTCCAAG
GCCAAGGCGT GGAAGGACAT CTGGGGCGCC GGCCAGGGCG TGGGCCAGAT CCACGACATC
CCGCCCGCTG GAGAGATCAT CGCGCGCATG AAGACCGAGT ACGACGCCGC CAAAGCGCGG
CTGGGTATCG CGCGCTAA
|
|---|
| Protein sequence | MPAARQLPQA LQNLALPVIA SPMFIVSYPE LVLAQCKAGI VGSFPALNAR PAELLDEWLT
QMQEELASFQ AANPGKPVGP IAVNQIVHTS NARLEHDVKV CVDHKVPIFI TSLRAPVREM
IDAVHSYGGI VLHDVINLRH AEKALEAGVD GLILVAAGAG GHAGMLSPFA LVGEVRKIFD
GPIALSGSIA TGDAVLAAQA MGADFAYVGT RFIASQEAHA NEAYKQSITD SAAADIIYTN
LFTGVHGNYI RESIVGAGLD PENLPVADKT KMDFSSGSSK AKAWKDIWGA GQGVGQIHDI
PPAGEIIARM KTEYDAAKAR LGIAR
|
|---|
| |