| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Reut_A0198 |
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| Symbol | dapF |
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| ID | 3610530 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia eutropha JMP134 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007347 |
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| Strand | - |
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| Start bp | 222866 |
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| End bp | 223732 |
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| Gene Length | 867 bp |
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| Protein Length | 288 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637689586 |
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| Product | diaminopimelate epimerase |
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| Protein accession | YP_294424 |
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| Protein GI | 73539904 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0253] Diaminopimelate epimerase |
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| TIGRFAM ID | [TIGR00652] diaminopimelate epimerase
[TIGR00654] phenazine biosynthesis protein PhzF family |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACTCC AGTTCACCAA GATGCACGGT GCCGGCAACG ACTTCGTCGT GCTCGACGGC
ATCCACCAGA AGCTCGACCT GACCACCGAA CAGTGGCGTG CGCTTGCCAG CCGGCATTTC
GGCGTCGGCG CCGACCAGAT GCTGATCGTG GAAAAGCCCA CGCGCGAGGA CGTGGATTTC
CGCTACCGCA TCTTCAATGC CGATGGCAGC GAGGTCGAGC ACTGCGGCAA TGGCGCGCGC
TGCTTCGTGC GCTTCGTCAC CGACAAGGGC ATGACCGACA AGCGCTCGGT GCGCGTGGAG
GTCATGAACG GCGTGATCAC GCTGACACTG CAGGACGACG GCCAGGTCAC CGTGGACATG
GGCGCGCCCG AACTGGAACC GGCTCGCGTG CCGTTCCGCC CGGATGGCCT GCCAGTCCGC
ACGCAAGGTG AAGACATCGC CTACGGGTTG GAAATCAACG GCCGCACGGC GTGGATTTCC
CCGGTGTCGA TGGGCAATCC GCACGCAGTG CAGGTGGTGG ACGATGTCGA GAACTTCCCG
GTACTGCAGG ACGGTCCGTT GATCGAACAT CACGCGACGT TCCCGAACCG CGTGAACGCC
GGCTTCCTGC AAGTGGTGGA CCGCCATACC GCGCGCCTGC GCGTGTTCGA ACGCGGCGCC
GGCGAGACGC TGGCCTGCGG CACGGGCGCT TGCGCGGCCG TCGTAGCCGG CATTCGCCGC
GGCCTGCTGG ATTCCCCGGT CAAGGTCCAC ACGCACGGTG GCGACCTGAA CATTGCCTGG
GACGGCGGCG CCGAACCCGT GCGCATGACC GGTCCGGCTA CCACCGTGTT CGAAGGCACC
ATTGACCTCG CCGCCCTGCC GGCCTGA
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| Protein sequence | MKLQFTKMHG AGNDFVVLDG IHQKLDLTTE QWRALASRHF GVGADQMLIV EKPTREDVDF
RYRIFNADGS EVEHCGNGAR CFVRFVTDKG MTDKRSVRVE VMNGVITLTL QDDGQVTVDM
GAPELEPARV PFRPDGLPVR TQGEDIAYGL EINGRTAWIS PVSMGNPHAV QVVDDVENFP
VLQDGPLIEH HATFPNRVNA GFLQVVDRHT ARLRVFERGA GETLACGTGA CAAVVAGIRR
GLLDSPVKVH THGGDLNIAW DGGAEPVRMT GPATTVFEGT IDLAALPA
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