| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Reut_A0181 |
|---|
| Symbol | |
|---|
| ID | 3610437 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia eutropha JMP134 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007347 |
|---|
| Strand | + |
|---|
| Start bp | 205233 |
|---|
| End bp | 206201 |
|---|
| Gene Length | 969 bp |
|---|
| Protein Length | 322 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 637689569 |
|---|
| Product | HAD family pyrimidine 5-nucleotidase |
|---|
| Protein accession | YP_294407 |
|---|
| Protein GI | 73539887 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1011] Predicted hydrolase (HAD superfamily) |
|---|
| TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01993] pyrimidine 5'-nucleotidase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGTCTTCCA GTCATTCCCC TTCGCGCCGT GTCCAGGCGC GCCTGCGCCG GCGCCCGGCC
GGCGATCAGT CCGGCGACAC GGTGTGGCTG TTCGATCTGG ACAACACGCT GCACGACGCC
TCGCATGCCA TCTTCCCGGC CATCAACCGG CTGATGACTG CGTACGTCGC GCGCGTACTC
GGCTGCGACG ACGCCACTGC GAGCCGCGTG CGCGTCGACT ATTGGCAGCG CTATGGCGCC
ACGCTGCTGG GCATGATCCG CCATCACGGC GTGGACCCCG CCGATTTCCT GCGCGCCGCG
CATGAATTCC CCGAACTGGC CGACATGGTG CGCGTGCGGC GCGGGCTGGC CGCGCATCTG
CGCCGGCTGC CCGGGCGCAA GATCATCGTC ACCAACGCGC CGCAGGCCTA CGCGCGCGCG
GTGCTCGATA TCGCCGGCAT CAGCCATTGC TTCGAGCGCG TGATCGCCAT TGAGCAGATG
TGGGTGCACG GGCATCTGCG CCCGAAGCCG GACCGGCGCA TGCTGCGCCG CCTGCTCGCG
CAGACGGGCA TCGCGCCGCA CCGGGCGGTG CTGGTGGAAG ACACGCTGTC GCATCTCAAG
CGCTACGCCG GCACGGGCAT TCGCACGGCC TGGGTCACGG GCTACCTGCG CACGATCGCG
CCATCGCGCC CGCACGTGGT GGCTGCGCCG GAAGCTTCCG GCAGCCGCGG CGATGCCGCG
GTGCGATCCA CGCTGGACGC CGAGGATCGC CAGCACGCGA GCCATGCCGC GCAAGAGCAT
TCGGTGACGC TGGTGGCGGC CGAATCGCAG GTCCCGCCGG CGGCGGGCGC TCCCGGGCTG
TCACCGCAGT CACAGCCTGA AAACGCGCCG CGGGTACGGG CGCGCGTGCC GAACCGGCCG
GCGTATGTGG ACATAAAAGT ACAATCGATG CATCAACTAC AACAAAGATT GCGGAGAACC
GGGTCATGA
|
|---|
| Protein sequence | MSSSHSPSRR VQARLRRRPA GDQSGDTVWL FDLDNTLHDA SHAIFPAINR LMTAYVARVL
GCDDATASRV RVDYWQRYGA TLLGMIRHHG VDPADFLRAA HEFPELADMV RVRRGLAAHL
RRLPGRKIIV TNAPQAYARA VLDIAGISHC FERVIAIEQM WVHGHLRPKP DRRMLRRLLA
QTGIAPHRAV LVEDTLSHLK RYAGTGIRTA WVTGYLRTIA PSRPHVVAAP EASGSRGDAA
VRSTLDAEDR QHASHAAQEH SVTLVAAESQ VPPAAGAPGL SPQSQPENAP RVRARVPNRP
AYVDIKVQSM HQLQQRLRRT GS
|
|---|
| |