| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Reut_A0159 |
|---|
| Symbol | |
|---|
| ID | 3609799 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia eutropha JMP134 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007347 |
|---|
| Strand | - |
|---|
| Start bp | 185474 |
|---|
| End bp | 187657 |
|---|
| Gene Length | 2184 bp |
|---|
| Protein Length | 727 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637689547 |
|---|
| Product | TonB-dependent receptor |
|---|
| Protein accession | YP_294385 |
|---|
| Protein GI | 73539865 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.630357 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCGGCAC CGCGCGGCCG TTCGCCCGAT TGCCATCGCA TCGAATCGCG AGCCATGTCT
TCTACCCTGC AACACCTCAT GCTGCGGCGC ACGCCGCTGG CAGCCTTTGC TGCCCTGATC
GTCTCGAACG GCGCATTCGC CCAGTCCGCC AGCGAACCTG CGGCGGCCCC TGCGCCCGCC
GCTGCCACCC TCAAGGAAGT GGTGGTCACC GCGAACCCGC TGGGCAGCGA CCTCAACGAC
ATGGTCGCGC CGGTCTCCTC ACTGAGCGGC GACGCGCTGT CGCTGCGCCA GAACAGCACG
CTCGGCGAAA CGCTGGACAA GTTGCCGGGC GTGTCGTCGA GCTACTTCGG CCCCAACGCC
AGCCGGCCCG TGATCCGCGG ACTCGATGCC GACCGCATCA AGGTGCTGCA GAACGGCGGC
TCCTCGGTCG ATGCCTCGAC GCTGTCCTAC GACCACGCCG TACCGATCGA TCCGCTCGTG
GCCGAGCGCA TTGAAGTCGT GCGCGGCCCC GCCGCGCTGA TGTACGGCGG CAACGCCATC
GGCGGCGTCG TCAACGTGAT CGATAACCGC ATCCCGAAGG AGCCCATTGA AGGCATCGGC
GGCGCTGTCG ATGCCAGCGC CACGGCCGGC GGCGACGTGG CGCGCAACGC CAGCGCGCTG
GTCGAGGCCG GCAACGGCCA GTTCGCAATC CACGCCGACG CCTTCGCGCG CAAGACCAGC
GACCTGCATA TTCCCGGATT CGCGCGTAGC GACCGCCTGC GCGCAAGCCA GCCGCTGCCC
GAGGGCGAAA CCGAGGCCAG CGGCCGCCTG CCCAACACCA GCGCGCAGCA GGACGGCGGC
GCGCTGGGCG GCTCGTACAC GTGGGCCGAC GGCTTCATCG GCGCGAACTA CAGCGCCTAC
CGCAACGAAT ACGGCACGCC TGCCGAAGAC GACGTCCGCC TGAAAATGCG CCAGGACCGC
TTCGCGCTCG AAGGCGAAGC GCGCAACCTG CAGGCCAACA CGTCCGGCAT CATCGAATCG
GTCAAGGGCA AGTTCAGCTA CACCGACTAT GAGCACAAGG AAATCGAAGA CGGCCAGGTC
GGCACCATCT TCAAGAACCA GGGCTGGGAC GCACGCTTCG AGGCCAAGCA CGCGAAGATC
GGCAACATGA GCGGGGTCGT CGGCACGCAG TTCGGCCACA CGCAGTTCTC CGCGCTCGGC
GAAGAAGCCT TCGTGCCGAG CACCAATACC GACAACGCCG CGCTGTTCGT CTTCGAAGAA
CTGCCGCTCG ATAGCGCCGG CGACTTCAAG CTCAACTTCG GCGGCCGGCT GGATCACAGC
AATATCAAGG CCAGTGCGAA CGGCAACGAC CGCTTCAGCG ATGCCGACCG CAGCTTCAAC
GCCACCAGTG CATCGGCGGG CCTGCTCTAC AAGCTGAATT CGCTGTGGTC GCTGACCAGC
AATGTGTCGT ACACCGAGCG CGCACCGACC TTCTACGAGC TGTACGCCAA CGGCCCGCAC
GTCGCCACCG GCGCCTGGGA GCTCGGCGAT CCCAACGCCA ACAAGGAACG CGCCACCTCG
GTGGATCTCG GCCTGCGCTA CAAGTACGGC CCGCACAGTG CCGGCGTGTC GGGCTACTAC
AGCCGCTTCG CCAACTACCT CGCACTGACG TCGACGGGCC GCTCGCGCGA CGAGGCTGGC
GACGTGGTCG CGTCCGGCAG TCCCGGCGCG CTGCCCGAGT TCGAGTACCT CGGCGTACCG
GCCACGCTGT ATGGTTTCGA AGCCGAAGGC AAGGCGCGGC TGTTCCAGAA GATGCTGACG
TCGAGCGATA CGCTGGACTT CGAGGCACGG GCGGATTATG TGCGCGGAGA GAACCGGGAT
ACCGGGGAGC CGCTGCCGAG GCTGGCGCCT TTGCGTCTGG GCGGCGCGCT GGTCTATGGT
GCGGGGCCTT GGGGGGCGCG TGTGGATGTT ACCTATGCGG CCAAGCAGAC GCGCGTGCCG
GTCAACGATA CGCCGACCGA TGCGTACACG CTTCTCAGCC TTGCGCTGAC GTACAAGTTC
AAGACTTCCG GGACACAGAC GCTGATCTAC CTGCGCGGCG ATAACCTGAC GAATCAGGAG
GCGCGGAATG CGTCGTCGAT TCTGCGGGAT ATTGCGCCGT TGCCGGGGAG GAGTGTGAAG
GTGGGGTTCA GGACGACGTT CTGA
|
|---|
| Protein sequence | MPAPRGRSPD CHRIESRAMS STLQHLMLRR TPLAAFAALI VSNGAFAQSA SEPAAAPAPA
AATLKEVVVT ANPLGSDLND MVAPVSSLSG DALSLRQNST LGETLDKLPG VSSSYFGPNA
SRPVIRGLDA DRIKVLQNGG SSVDASTLSY DHAVPIDPLV AERIEVVRGP AALMYGGNAI
GGVVNVIDNR IPKEPIEGIG GAVDASATAG GDVARNASAL VEAGNGQFAI HADAFARKTS
DLHIPGFARS DRLRASQPLP EGETEASGRL PNTSAQQDGG ALGGSYTWAD GFIGANYSAY
RNEYGTPAED DVRLKMRQDR FALEGEARNL QANTSGIIES VKGKFSYTDY EHKEIEDGQV
GTIFKNQGWD ARFEAKHAKI GNMSGVVGTQ FGHTQFSALG EEAFVPSTNT DNAALFVFEE
LPLDSAGDFK LNFGGRLDHS NIKASANGND RFSDADRSFN ATSASAGLLY KLNSLWSLTS
NVSYTERAPT FYELYANGPH VATGAWELGD PNANKERATS VDLGLRYKYG PHSAGVSGYY
SRFANYLALT STGRSRDEAG DVVASGSPGA LPEFEYLGVP ATLYGFEAEG KARLFQKMLT
SSDTLDFEAR ADYVRGENRD TGEPLPRLAP LRLGGALVYG AGPWGARVDV TYAAKQTRVP
VNDTPTDAYT LLSLALTYKF KTSGTQTLIY LRGDNLTNQE ARNASSILRD IAPLPGRSVK
VGFRTTF
|
|---|
| |