Gene Reut_A0039 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagReut_A0039 
Symbol 
ID3611202 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia eutropha JMP134 
KingdomBacteria 
Replicon accessionNC_007347 
Strand
Start bp52533 
End bp53957 
Gene Length1425 bp 
Protein Length474 aa 
Translation table11 
GC content67% 
IMG OID637689427 
ProductATP-dependent RNA helicase DbpA 
Protein accessionYP_294265 
Protein GI73539745 
COG category[J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair 
COG ID[COG0513] Superfamily II DNA and RNA helicases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACACAA GCTCCCTGCC CCCGCAAGCC GGCGCTGCCG CGCCCGCCGC CGATTTCTCC 
ACCCTGCCCC TGGCGCCGGC CACGCTCGCC ACGCTGGCCC AGCTCGGCTA TGACGAAATG
ACGCCGATCC AGGCCGCGAG CCTGCCGCTG ACGCTCGCCG GCCACGACCT GATCGCGCAG
GCCAAGACCG GCAGCGGCAA GACCGCTGCC TTCGCGCTGG CGCTGCTGCA CAGGCTCGAT
GCGCGCCGCT TCGACGTCCA GGCGATGGTG CTGTGCCCAA CGCGCGAGCT GGCCGACCAG
GTCACGCAGG AAATCCGCCG CCTCGCACGG GCCGAAGAGA ACGTGAAGGT GCTGACGCTG
TGCGGCGGCT CGCCGATGCG CCCGCAGGTG GACAGCCTGG TCCACGGCGC GCACGTCGTG
GTGGGCACGC CGGGCCGCAT CCTCGACCAT ATCGACCGGG GCAGCCTCGA ACTGTCCGCG
ATCAACACAC TGGTGCTCGA CGAAGCGGAC CGCATGCTCG ACATGGGCTT TTTCGACGAC
ATCTCGTATG TGGCCAGCCG CTGCCCGCGC GAACGCCAGA CGATGCTGTT TTCGGCCACG
TATCCGGCGG GCATCGACAA GCTCAGCCAG AAGTTCCTGC GCAAGCCGCA GGAGGTGAAG
CTGGCCGAGA AGCACGACAG CTCGAGCATC CGCCAGTATT TCTATGAAGT CGATGAGAGC
GAGCGTCTCA GCGCCGTGGG CCGCCTGCTC GACCATTTCC GCCCGGCCAG CACGCTGGCC
TTCTGCAATA CCAAGGCGCG CTGCCGCGAT CTGGTCGACC TGCTGCGCGG ACAGGGCTTT
CAGGCGCTGG CCTTGCACGG CGACCTGGAG CAGCGCGACC GCGATCAGGT GCTCGTGCAG
TTCGCCAACG GCAGCTGCTC GGTGCTGGTA GCGACGGACG TGGCCGCGCG CGGGCTGGAT
ATCGCCCAGC TCGAAGCCGT GATCAACGTG GAAATCACGC CCGACCCCGA AGTGCATATC
CACCGCATCG GCCGCACTGG CCGCGCCGGC GAGGAAGGCC ACGCGTTCAG CCTGGTCAGC
ATGGACGAGA TGGGGCGCGT AGGCAACCTG GAGCAGCACC ACGGCGGCGA ATTCGAATGG
CACCCGCTGG CCGAACTGCG CGCCGCGAGC ACCGAGCGCC TGCTGCCGCC GATGGTCACG
CTGCAGATGC TGGGCGGCCG CAAGGAAAAG ATCCGGCCCG GCGATATCCT CGGTGCGCTG
ACCGGCGAGG CCGGCTTCAC CAAGGAACAG ATCGGCAAGA TCAATGTGAT GGAGATGTCG
ACCTACATCG CGGTGGATCG CGCCATCGGG CGAGAAGCGG TGCGCCGGTT GAACGCGGGG
AAGGTGAAGG GCAAGAAGGT GAAGGTGAGG ATGCTGACCG AGTGA
 
Protein sequence
MNTSSLPPQA GAAAPAADFS TLPLAPATLA TLAQLGYDEM TPIQAASLPL TLAGHDLIAQ 
AKTGSGKTAA FALALLHRLD ARRFDVQAMV LCPTRELADQ VTQEIRRLAR AEENVKVLTL
CGGSPMRPQV DSLVHGAHVV VGTPGRILDH IDRGSLELSA INTLVLDEAD RMLDMGFFDD
ISYVASRCPR ERQTMLFSAT YPAGIDKLSQ KFLRKPQEVK LAEKHDSSSI RQYFYEVDES
ERLSAVGRLL DHFRPASTLA FCNTKARCRD LVDLLRGQGF QALALHGDLE QRDRDQVLVQ
FANGSCSVLV ATDVAARGLD IAQLEAVINV EITPDPEVHI HRIGRTGRAG EEGHAFSLVS
MDEMGRVGNL EQHHGGEFEW HPLAELRAAS TERLLPPMVT LQMLGGRKEK IRPGDILGAL
TGEAGFTKEQ IGKINVMEMS TYIAVDRAIG REAVRRLNAG KVKGKKVKVR MLTE