| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Reut_A0019 |
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| Symbol | |
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| ID | 3611508 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia eutropha JMP134 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007347 |
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| Strand | - |
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| Start bp | 28660 |
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| End bp | 31167 |
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| Gene Length | 2508 bp |
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| Protein Length | 835 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637689407 |
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| Product | diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) |
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| Protein accession | YP_294245 |
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| Protein GI | 73539725 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2905] Predicted signal-transduction protein containing cAMP-binding and CBS domains
[COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCGCATC ACACCTTGGA TATCGAGATC GAACGTCTGG TATCGACATC GACGCTGGAG
TGCGCGCCGC TGACGCCAGT CGGCGAGGTC GTTGCCCGGA TGGCGGAGCG CCGCTGCAGC
TCGATCGTAG TGATGGACCA AGGGCGGGCG GTCGGCATTT GGACCGAACG CGACGCGTTG
GCGCTCGGCG AAGCTTCCGA TGCACTGACC AGGCCCATCA GCGCGCTGAT GAGCCACCCC
GTATTGTCGC TGCCCGGGTC CACGCGCCTC GGCGATGCGG TCGTGCACTT CAAGAACCAG
GGCATCCGCC ATTGTCTCGT CGTCGACGAC GCTGAGCGCC CGCTCGGCAT GCTGACGCAG
ACCGATCTCG TCATGAGCCA CGGCGCGGAG TTCTTCTTGC GCACCAAGGC GATCGACTCG
GTCAAGTTGC CTCAGCCCGT CATGATCGCG CCGACGACCA GGCTATTCGA CGCCATGCAA
ACCATGCGTG CCGGCAGCCT GAGCGCCATC GTCATTCGCT ACGTCGGCGA TGAGTACGGC
ATCCTGACCG AACGCGATAT CGTCCGGCTG GCCGCCGCCA ATGCGCTAGG CGACACCGTT
GCATCCCATG CGACACGTCC GCTGCGTTCG CTGACCCGAT CCCAAAGTCT CTACGCCGCC
CGGCAGGTGC TGGTTGAAAA CCGCATCCGC CATGTCGGCG TGCTCGACGA TGGGGGCGAG
TTGGTCGGAC TGCTGAGCCT GGCCGACATT CTCAGCAATA TCGAATACGA GTACGTGCAC
GAACTCCAGA TCGCGCTGCG CGAGCGCGAT GAGGCACTGC TCGAATCCGC CTATCACCTG
AAGCTGGCCG ACCGAGTGTT CCAGGCCACG CTCGACGGCG TCATGGTGAC GGATCTGAAT
GGGGTGATCG AACGCGTAAA TCCGGCCTTC ACGCAACTGA CCGGCTATAC GCAGGCCGAA
GCCATCGGCC GCACGCCGAA GATGCTGAGC TCGGGCAAGC AAAGCGCCGC GTTCTACCAG
TCGCTCTGGC GACAGCTGCG CGAAAACGGC GGCTGGAAGG GCGAAATCTG GAACCGCCGC
AAGAACGGCG AACTCTATCT GGAATACCTG TCGATCTCCG GCATCTACGG CCAGCATGGG
CGCTGCACGC ACTACGCCGC GATTTTTTCG GACATCACGC AGCGCCGGAT GGACGAAGAG
CGCTTGAACC ATCTGGCCAT GCACGACGCC CTGACGTCGC TGCCAAACCG AACCCTGTTC
AGCGAGCGCC TGAAGCAAGC CATCGCCCGC GCCAAGCGTG CCGCACGACG CGTAGCGGTG
ATGTTCATCG ACCTGGACCG CTTCAAGCTG ATCAACGACA CCATGGGACA CGGCGTCGGC
GACGAGGCGC TCAAAGTCAT TGCCCGGCGG CTCAAAGAAG CTATTCGCGA AAGCGATACC
GTGGCGCGCC TGGGCGGCGA CGAATTCACG GTGATTATCG AAGATGTCGA AGACATCCGG
CACGTCGCGC AGATTGCGCA GGCATTGCTG AACGTGGTCG GTCAACCGAT CGATGCGCAC
GGCCGCACCG TATTCGTAAC GCCGAGCATC GGCATCAGCA TCTACCCCGA CGACGGCATC
GATCGCAAGC AGCTGCTGAT GCAGGCCGAC CGCGCCATGT ACGAGGCCAA GGAAGAAGGC
AAGAACAACT TCCGCTTCTT CGCCACGCAG ATGACATCGT CGTCGATGGA GCGGATCACG
TTGGAAAGCG AGCTGCGCAA CGCGTTGGCT GCAGGGGAAT TTCGCCTGCA CTACCAGCCG
GTCTTCGATT TGCGCAGCGG GGACATCGTC AGCGTGGAAG CGCTGCTGCG CTGGCAGCAT
CCGACACGCG GGCTGCTGGC GCCGGGCGCG TTCATCACCA CGGCCGAGGA ATCCGCACTG
ATCGTGCCGA TCGGCGCGTG GGTCCTGCGC GAAGCCTGCA GGCAGGCGCG CATCTGGATG
GATGAGGGCT TCGAATTCGG CCGGATCGCC GTCAACCTCT CCGCCCGGCA ATGCCGTCAC
GCGCAGTTCC TGCACGACCT GACCACCATC CTCAGCGATG CCGGCGTGCC GCCGACGCGG
CTGCAGCTCG AACTGGTCGA AAGCATGGCC ATGACCGGCA ATGGCGTGAC TGAATCGCTG
CTGGACGAAC TGGCGCAGCG TGGCGTGAGC CTGGCCATCG ATGATTTCGG TACGGGCTAT
TCCTCGTTCA TTTATCTGCA GACATTGCCT GTGGATATGT TGAAGGTGGA TCGGTCGTTT
CTCGCCGCGA TCGATGGACG CCGCCGGGAT GGAACGATCC TGCGCGCAAT GGTGGCGATG
GCGCATTCGC TTGGGCTGAC GGTGGTGGCT GAGGGCGTGG AACAGGCGGA GCAAGTGCAG
TTCCTGCGTG AGATCGGGTG TGATCGGGGG CAGGGGTTTT TCCTGGCGCG GCCGGTGCCG
GCTGAGCAGT TCCGGCGGGT GGGGATTGGG GCGGGAGAGG TTCGTTGA
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| Protein sequence | MPHHTLDIEI ERLVSTSTLE CAPLTPVGEV VARMAERRCS SIVVMDQGRA VGIWTERDAL
ALGEASDALT RPISALMSHP VLSLPGSTRL GDAVVHFKNQ GIRHCLVVDD AERPLGMLTQ
TDLVMSHGAE FFLRTKAIDS VKLPQPVMIA PTTRLFDAMQ TMRAGSLSAI VIRYVGDEYG
ILTERDIVRL AAANALGDTV ASHATRPLRS LTRSQSLYAA RQVLVENRIR HVGVLDDGGE
LVGLLSLADI LSNIEYEYVH ELQIALRERD EALLESAYHL KLADRVFQAT LDGVMVTDLN
GVIERVNPAF TQLTGYTQAE AIGRTPKMLS SGKQSAAFYQ SLWRQLRENG GWKGEIWNRR
KNGELYLEYL SISGIYGQHG RCTHYAAIFS DITQRRMDEE RLNHLAMHDA LTSLPNRTLF
SERLKQAIAR AKRAARRVAV MFIDLDRFKL INDTMGHGVG DEALKVIARR LKEAIRESDT
VARLGGDEFT VIIEDVEDIR HVAQIAQALL NVVGQPIDAH GRTVFVTPSI GISIYPDDGI
DRKQLLMQAD RAMYEAKEEG KNNFRFFATQ MTSSSMERIT LESELRNALA AGEFRLHYQP
VFDLRSGDIV SVEALLRWQH PTRGLLAPGA FITTAEESAL IVPIGAWVLR EACRQARIWM
DEGFEFGRIA VNLSARQCRH AQFLHDLTTI LSDAGVPPTR LQLELVESMA MTGNGVTESL
LDELAQRGVS LAIDDFGTGY SSFIYLQTLP VDMLKVDRSF LAAIDGRRRD GTILRAMVAM
AHSLGLTVVA EGVEQAEQVQ FLREIGCDRG QGFFLARPVP AEQFRRVGIG AGEVR
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