Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Reut_A0003 |
Symbol | gyrB |
ID | 3611492 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia eutropha JMP134 |
Kingdom | Bacteria |
Replicon accession | NC_007347 |
Strand | + |
Start bp | 3726 |
End bp | 6251 |
Gene Length | 2526 bp |
Protein Length | 841 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637689391 |
Product | DNA gyrase subunit B |
Protein accession | YP_294229 |
Protein GI | 73539709 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0187] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit |
TIGRFAM ID | [TIGR01059] DNA gyrase, B subunit |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.150441 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACCGAAC AGCAGAACCC GCAACAGGAA AATACCTACG GAGCCTCTTC GATCCAGATC CTGGAAGGCC TGGAGGCGGT ACGCAAGCGT CCGGGCATGT ACATCGGCGA CACCTCCGAC GGCACCGGCC TGCACCACCT CGTCTTCGAG GTGCTGGACA ACTCCATCGA CGAAGCGCTG GCCGGCTACT GCACCGAGAT CACGGTCACC ATCCACAGCG ACAACTCGAT CTCCATCGTC GACAACGGCC GCGGCATTCC GCCCCTGGTC AAGTTCGACG ACAAGCACGA ACCCAAGCGC AGCGCGGCGG AAATCGCCAT GACCGAGCTG CACGCCGGCG GCAAGTTCAA CCAGAACAGC TACAAGGTGT CCGGCGGCCT GCACGGCGTG GGCGTGTCCT GCGTGAACGC GCTGTCCAAG TGGCTGCGCC TGACCGTGCG CCGTGACGGC AAGGTCCACC TGATCGAATT CGCCAAGGGC GACGTGCAGA ATCGCATCAT CGAGACCGTC AACGGCCCGG ACGGCCAGCC GGTCGAAGTG TCCCCGATGA AGATCATCGG CGACACCGAC AAGCGTGGCA CCGAGGTGCA CTTCCTGGCC GACGAGGAAA TCTTCACCAA CGTCGAGTTC CACTACGAAA TCCTCTCCAA GCGGATTCGT GAACTCTCGT TCCTGAACAA CGGCGTCCAC ATCAAGCTGG TCGACCAGCG CACCGGCAAG GAAGAAGACT TCGCCTTCTC CGGCGGCGTG AAGGGCTTTG TCGAGTACAT CAACCGCGCC AAGACCGTGC TGCACCCGAA CATCTTCTAC GCGAACGCCG AGAAAGACGG CATTGCGGTG GAAGTGTCGA TGCAGTGGAA CGACGGCTAC AACGAGCAGG TGCTCTGCTT CACCAACAAC ATCCCGCAGC GGGATGGCGG CACCCACCTG ACCGGCCTGC GCGCCGCGAT GACCCGCGTC ATCAACAAGT ACATCGAAGA AAACGAGATC GCCAAGAAGG CCAAGGTCGA AACCAGCGGC GACGACATGC GCGAAGGCCT GGCCTGCGTG CTGTCCGTCA AGGTGCCCGA GCCCAAGTTC AGCTCGCAGA CCAAGGACAA GCTCGTTTCG TCGGAAGTGC GCCTGCCCGT GGAAGAACTC GTCAGCAAGG CGCTGAACGA CTTCCTGCTC GAAACGCCCA ACGACGCTAA GACCATCTGC GGCAAGATCG TCGACGCCGC CCGCGCGCGC GAAGCCGCCC GCAAGGCCCG CGAAATGACG CGCCGCAAGG GCGTCATGGA CGGCATGGGC CTGCCCGGCA AGCTCGCCGA CTGCCAGGAA AAAGACCCGG CCCAGTCCGA ACTCTTCCTG GTGGAGGGTG ACTCCGCAGG CGGCTCCGCC AAGCAGGGCC GCGACCGTAA GTTCCAGGCC ATCCTGCCGC TCAAGGGCAA GATCCTGAAC GTCGAGCGCG CGCGCTTCGA CAAGATGCTC TCCAGCCAGG AAGTGCTCAC GCTCATCACC GCGCTGGGCA CCGGCATCGG CAAGGACGAC TACAACCTGG ACAAGCTGCG CTACCACCGC ATCATCATCA TGACCGACGC GGACGTGGAC GGCTCGCACA TCCGCACGCT GCTGCTGACG TTCTTCTACC GCCAGATGCC CGACATCATC GAGCGCGGCT ACGTGTACAT CGCCCAGCCG CCGCTCTACA AGATCAAGCA CGGCAAGGAA GAGCGCTACA TCAAGGACGA CGTCGAACTC AACGCCTACC TGCTCAAGCT GGCCATGGAA AAGGCCGTGC TCGTGCGCCC GGATGGCACG GAGATCAATG GCGATGCGCT GACCGAGCTG GCGCGCCAGT ACCAGCTCAC GGAAGGCGTG ATCGGCCGCC TGTCACGCAT CGTGGATACG GATGCGCTGC GCGCGATTGC CGATGGCGTA ACGCTGGACC TGGACAGCGC ACCGGCGGCC GAGGCATCGG CCGTGGCGCT GAAGACCAAG CTGGCCGAGA TGCATGCCAA GACGCTGCTC GGCGCCGCCG TCAACGACGA TGGCACGGCG GACGTGTATG CCCAGTTCGA CGAAAAGACC GACAAGCATC GCCTGATGAT TGCGCGTCGT CACCATGGCA ACGTGCGGCT GTCGCACATG GATGCAGACT TTGTCCACGG GGCGGATTAC GCGGCTCTGT CCAATGCGGC CAAGACGTTC CAGGGGCTGA CGCCTGAGGG GACCAAGGTG CAGCGCGGGG AAGGTGACAA GATGAGGGAT CAGACTGTCA ATGACTTCCA TGGGGCGATG CAGTGGTTGC TTTCGGAGGC GGAGCGTGGG GTTTCGAGGC AGCGGTATAA GGGGCTTGGT GAAATGAACC CTGAGCAGCT GTTTGAGACT ACCCTCGACG TTACGCAGCG GCGTCTGCTG AAGGTGCAGA TTGAGGATGC TATTGCAGCT GACCAAATCT TTACCACCCT TATGGGGGAT GAGGTGGAGC CGCGGAGGAA CTTTATTGAG AGTAATGCGT TGGTGGCGCG GAATATTGAT GTTTAA
|
Protein sequence | MTEQQNPQQE NTYGASSIQI LEGLEAVRKR PGMYIGDTSD GTGLHHLVFE VLDNSIDEAL AGYCTEITVT IHSDNSISIV DNGRGIPPLV KFDDKHEPKR SAAEIAMTEL HAGGKFNQNS YKVSGGLHGV GVSCVNALSK WLRLTVRRDG KVHLIEFAKG DVQNRIIETV NGPDGQPVEV SPMKIIGDTD KRGTEVHFLA DEEIFTNVEF HYEILSKRIR ELSFLNNGVH IKLVDQRTGK EEDFAFSGGV KGFVEYINRA KTVLHPNIFY ANAEKDGIAV EVSMQWNDGY NEQVLCFTNN IPQRDGGTHL TGLRAAMTRV INKYIEENEI AKKAKVETSG DDMREGLACV LSVKVPEPKF SSQTKDKLVS SEVRLPVEEL VSKALNDFLL ETPNDAKTIC GKIVDAARAR EAARKAREMT RRKGVMDGMG LPGKLADCQE KDPAQSELFL VEGDSAGGSA KQGRDRKFQA ILPLKGKILN VERARFDKML SSQEVLTLIT ALGTGIGKDD YNLDKLRYHR IIIMTDADVD GSHIRTLLLT FFYRQMPDII ERGYVYIAQP PLYKIKHGKE ERYIKDDVEL NAYLLKLAME KAVLVRPDGT EINGDALTEL ARQYQLTEGV IGRLSRIVDT DALRAIADGV TLDLDSAPAA EASAVALKTK LAEMHAKTLL GAAVNDDGTA DVYAQFDEKT DKHRLMIARR HHGNVRLSHM DADFVHGADY AALSNAAKTF QGLTPEGTKV QRGEGDKMRD QTVNDFHGAM QWLLSEAERG VSRQRYKGLG EMNPEQLFET TLDVTQRRLL KVQIEDAIAA DQIFTTLMGD EVEPRRNFIE SNALVARNID V
|
| |