| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Reut_D6509 |
|---|
| Symbol | |
|---|
| ID | 3607875 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia eutropha JMP134 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007337 |
|---|
| Strand | + |
|---|
| Start bp | 64748 |
|---|
| End bp | 66169 |
|---|
| Gene Length | 1422 bp |
|---|
| Protein Length | 473 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 637689367 |
|---|
| Product | conjugal transfer protein TrbI |
|---|
| Protein accession | YP_293664 |
|---|
| Protein GI | 72384311 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG2948] Type IV secretory pathway, VirB10 components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACAGAAA ACGCCGATCA GATGGCACCT GACGCTTCGC CTGGCGAAGT GTCCAAGAAG
GCGGGCGTCC GTCGCGTCAA CAACATGCCC ATGTACATCC TCGGCGGCGT CCTGCTGTCG
TTCGTGCTGG TCATGGCCCT GGTCGCGGCG GATCGCGCGG CCAAGCAGAA CGCGCCGGCG
GACGGCCCCA AGGAGAAGGC CGGCAACACG TCGATGTTCG CCAAGGAGAT CGCAGGCGAC
AAGACCGGCG GCTTGATCGA GCCGGCAAGC CCGCTCAAGG TGCCCGACAT GCCGACCGGC
CCGGCGTCGG CTCCGCTGGA GATCGCGCGG CCGTCCAACC CGGACGCGCC GCCGGCCCCG
CCGGCCAACC CCGGCAACCC GGGCCAGCCG GTGAACGACG ACGAGGCCCA GCGCATCCGC
ATGGCGAAGA TGCAGATGTT CGGCGAAGCC GTGAAGGCCA AGACCACCGT GCGCGTGGAT
GCCCCGCGTA GCAACGGCTC CGCGCCGGGT GGCCCGAGCA CCTACACCGG CACGCCGCAG
ACGCGCGATG AAATGCTGAA CCGCATCGCA GCGGTGCAGC AGCAAATCGA CGCGCAGCGC
AGCAACGATC CGACCGCCGC CTATCAAGCA CGCCTGGCGC AGATTCGCGG CATGGGCGTC
GGTGGTGGCG GCGCGGCTCC GGCCGCCGGC GGCATGGGCG CGGGCGGTGC GCCGCAGCTC
CTGCAAACCT CGACCAGCGG CGGCGGGCGC AACAGCATGG CGCAGTTCGG CCAAGGTGGG
CAGGGCGACC GCTGGAAGCT GGATTCGCAG CCGGAAGCGC CGCGCACACC GTTCGAGCTG
CGCGCGGGCT TCGTCGTGCC GGCCACGCTC ATTTCGGGCA TCAACTCCGA TCTGCCGGGC
CAAATCATGG CCCAGGTCGC GCAGGACGTG TACGACACAC CGACCGGCAA GCACCTGTTG
ATCCCGCAGG GATCGCGCCT CGTCGGCTCG TATTCGAGCG ACGTGGCCTA CGGCCAAGCG
CGCGTGCTGG TTGCGTGGCA ACGCATCGTG TTCCCCGATG GCAAGGCGAT GGACATTGGC
GCGATGCCAG GCGCGGACAG CGCGGGATAC GCGGGCTTCC ACGACCAGGT GAACAACCAC
TATGTGCGCC TGTTCGGCTC GGCCTTCCTC ATGTCCGGCG TGACAGCAGG CATCACCTAC
AGCCAACGCC AGAACCAGGC CACAAACACC TATGGCGCAC CGAGCGCCAG CAGTGCCCTA
AGCGAAGCCC TCGGCCAGCA GCTCGGCCAG GTTACGGCGC AACTCATCGC CAAGAACCTG
AGCATTTCGC CGACGCTGGA AATTCGGCCG GGGTATCGCT TCAACGTCGT GGTCACGAAG
GACATGACGT TTTCCAAGCC GTACCGTTCC TTCGATTACT AA
|
|---|
| Protein sequence | MTENADQMAP DASPGEVSKK AGVRRVNNMP MYILGGVLLS FVLVMALVAA DRAAKQNAPA
DGPKEKAGNT SMFAKEIAGD KTGGLIEPAS PLKVPDMPTG PASAPLEIAR PSNPDAPPAP
PANPGNPGQP VNDDEAQRIR MAKMQMFGEA VKAKTTVRVD APRSNGSAPG GPSTYTGTPQ
TRDEMLNRIA AVQQQIDAQR SNDPTAAYQA RLAQIRGMGV GGGGAAPAAG GMGAGGAPQL
LQTSTSGGGR NSMAQFGQGG QGDRWKLDSQ PEAPRTPFEL RAGFVVPATL ISGINSDLPG
QIMAQVAQDV YDTPTGKHLL IPQGSRLVGS YSSDVAYGQA RVLVAWQRIV FPDGKAMDIG
AMPGADSAGY AGFHDQVNNH YVRLFGSAFL MSGVTAGITY SQRQNQATNT YGAPSASSAL
SEALGQQLGQ VTAQLIAKNL SISPTLEIRP GYRFNVVVTK DMTFSKPYRS FDY
|
|---|
| |