| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Reut_D6505 |
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| Symbol | |
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| ID | 3607937 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia eutropha JMP134 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007337 |
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| Strand | + |
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| Start bp | 59998 |
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| End bp | 62556 |
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| Gene Length | 2559 bp |
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| Protein Length | 852 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637689363 |
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| Product | conjugal transfer protein TrbE |
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| Protein accession | YP_293660 |
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| Protein GI | 72384307 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3451] Type IV secretory pathway, VirB4 components |
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| TIGRFAM ID | [TIGR00929] type IV secretion/conjugal transfer ATPase, VirB4 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00158384 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCGAAG CAATCGCAAT TGCCATTGCT GTGCTCGGTG CGGTTCTGTT GCTCATCCTC
TTTGCCCGCA TCCGGGCTGT CGATGCCGAG CTGAAGCTCA AGAAGCATCG CGCCAAGGAT
GCCGGCCTGG CCGATCTGCT CAATTACGCC GCCGTGGTCG ATGACGGCGT GATCGTGGGC
AAGAACGGCT CCTTTATGGC CGCCTGGCTG TACAAGGGTG ATGACAACGC CAGCAGCACC
GAGGAACAGC GGGAAATGGT GTCGTTCCGC ATCAACCAGG CCCTGGCGGG CCTGGGGAAC
GGCTGGATGG TGCATGTCGA TGCTGTGCGT CGGCCTGCGC CGAACTACTC GGAGCGGGGC
GTGTCATCGT TCCCCGACTC CGTTTCCTTC GCCATTGACG AGGAACGCCG GCGCTTGTTC
GAGGGCCTGG GCGCGATGTT CGAGGGCTAC TTTGTCCTGA CCGTCACGTG GTTCCCGCCA
GTGCTGGCCC AGCGCAAGTT TGTCGAACTC ATGTTCGATG ACGATGCGGT GGCTCCCGAC
CATACGGCGC GCACTACGGG CCTGATTGCG CAGTTCAAGC GCGAGATCAC CAGCCTGGAA
TCGCGCCTGT CCTCGGCGGT CAAGATGACG CGCCTGCGCG GCCAAAAAGT CGTGTCGGAA
GAGGGCAGGG AAGTCACGCA CGATGACTTC CTGAGCTGGT TGCAGTTCTG CGTGACGGGC
CTCCATCACC CGGTCATGCT GCCCAGCAAT CCGATGTACC TCGATGCGGT AATCGGCGGG
CAAGAGCTGT GGGGCGGCGT CGTGCCCAAG ATCGGGCGCA AGTTCATCCA GGTGGTCGCC
ATCGAAGGCT TCCCCTTGGA GTCAACGCCT GGGGTGCTCT CGGCCCTGGC CGAGCTGCCC
AGCGAATACC GCTGGTCGAG CCGCTTCATC TTCATGGATC AGCACGAGTC CTTGAAGCAC
CTGGACAAGT TCCGCAAGAA GTGGAAGCAG AAGATTCGCG GCTTCTTCGA TCAGGTGTTC
AACACGAATA CCGGCTCGAT CAACCAGGAC GCGGCCGCGA TGGTCGGCGA CGCCGAGGCG
GCCATCGCCG AGGTCAACAG CGGCTTGGTG GCGGCCGGCT ACTACACCAG CGTAGTCGTG
CTGATGGACG AGGATCGGGA GCGCCTGGCG GCCTCCGCGC TCCTGGTCGA GAAGGCCGTC
AACCGCCTGG CCTTCGCGGC CCGTATCGAG ACGATCAACA CGCTCGATGC GTACCTGGGC
AGCTTGCCCG GCCACGGCGT CGAGAACGTG CGCCGGCCGC TCATCAACAC GATGAACCTG
GCCGACCTGC TGCCGACAAG CTCGATCTGG ACGGGCAGCG CCACGGCTCC GTGCCCGATG
TACCCGCCGC TGTCGCCGGC GCTCATGCAC TGCGTGACGG TGGGCGCTAC GCCGTTCCGC
CTGAACCTGC ACGTGCGCGA CCTGGGCCAC ACCTTCATGT TCGGCCCGAC CGGCGCAGGC
AAATCGACGC ACCTGGGCAT CATCGCCGCG CAGCTCCGTC GCTACGCCGG CATGTCGATC
TACGCCTTCG ACAAGGGCAT GTCGATGTAC CCACTCGCGG CCGGCATCCG CGCGGCCACG
AAGGGCAAGA GCGGCCTGCA TTTCACGGTG GCCGCCGACG ATGACCGCCT GGCGTTCTGC
CCGCTCCAGT TCCTCGAAAC GAAGGGGGAT AGGGCCTGGG CGATGGAGTG GATCGACACC
ATCCTGGCGT TGAACGGCGT CAACACCACG CCGGCGCAGC GCAACGAGAT CGGCAACGCG
ATCATGAGCA TGCACGCCAG CGGCGCGCGC ACGCTCTCCG AGTTCTCGGT GACGATTCAG
GACGAGGCGA TCCGCGAGGC CATCAAGCAG TACACGGTGG ACGGCTCGAT GGGCCACCTG
CTCGACGCCG AAGAGGACGG CCTGTCGCTG TCCGACTTCA CGGTGTTCGA GATCGAAGAG
CTGATGAACC TGGGCGAGAA GTTCGCGCTG CCGGTGCTGC TCTACCTGTT CCGCCGCATC
GAGCGCGCAC TGAAAGGCCA GCCCTCCGTC ATCATCCTGG ACGAAGCCTG GTTGATGCTG
GGCCACCCCG CGTTCCGCGC CAAGATCAGG GAATGGCTCA AGGTGCTGCG CAAGGCCAAC
TGCCTTGTGC TGATGGCGAC GCAAAGCCTC TCCGACGCGG CCAACTCGGG CATCTTGGAC
GTGATCGTGG AATCGACCGC GACCAAGATT TTCCTGCCTA ACGTCTACGC CAGGGATGAG
GACACATCGG CGCTCTATCG CCGTATGGGC CTCAACGCGC GTCAGATCGA AATCCTGGCG
ACTGCCATTC CGAAGCGTCA GTACTACTAC GTCTCGGAGA ACGGCCGCCG TCTCTATGAC
CTTGCCCTGG GGCCGATGGC CCTGGCCTTC GTCGGTGCGT CCGACAAGGA ATCGGTCGCC
ACCATCAAGA GCCTCGAAGC CAAGTTCGGC CACGAATGGG TGCATGAGTG GCTGGCCGGC
CGTGGGCTGA ATCTCAACGA CTACCTGGAG GCCGCATGA
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| Protein sequence | MIEAIAIAIA VLGAVLLLIL FARIRAVDAE LKLKKHRAKD AGLADLLNYA AVVDDGVIVG
KNGSFMAAWL YKGDDNASST EEQREMVSFR INQALAGLGN GWMVHVDAVR RPAPNYSERG
VSSFPDSVSF AIDEERRRLF EGLGAMFEGY FVLTVTWFPP VLAQRKFVEL MFDDDAVAPD
HTARTTGLIA QFKREITSLE SRLSSAVKMT RLRGQKVVSE EGREVTHDDF LSWLQFCVTG
LHHPVMLPSN PMYLDAVIGG QELWGGVVPK IGRKFIQVVA IEGFPLESTP GVLSALAELP
SEYRWSSRFI FMDQHESLKH LDKFRKKWKQ KIRGFFDQVF NTNTGSINQD AAAMVGDAEA
AIAEVNSGLV AAGYYTSVVV LMDEDRERLA ASALLVEKAV NRLAFAARIE TINTLDAYLG
SLPGHGVENV RRPLINTMNL ADLLPTSSIW TGSATAPCPM YPPLSPALMH CVTVGATPFR
LNLHVRDLGH TFMFGPTGAG KSTHLGIIAA QLRRYAGMSI YAFDKGMSMY PLAAGIRAAT
KGKSGLHFTV AADDDRLAFC PLQFLETKGD RAWAMEWIDT ILALNGVNTT PAQRNEIGNA
IMSMHASGAR TLSEFSVTIQ DEAIREAIKQ YTVDGSMGHL LDAEEDGLSL SDFTVFEIEE
LMNLGEKFAL PVLLYLFRRI ERALKGQPSV IILDEAWLML GHPAFRAKIR EWLKVLRKAN
CLVLMATQSL SDAANSGILD VIVESTATKI FLPNVYARDE DTSALYRRMG LNARQIEILA
TAIPKRQYYY VSENGRRLYD LALGPMALAF VGASDKESVA TIKSLEAKFG HEWVHEWLAG
RGLNLNDYLE AA
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