| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Reut_D6504 |
|---|
| Symbol | |
|---|
| ID | 3607936 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia eutropha JMP134 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007337 |
|---|
| Strand | + |
|---|
| Start bp | 59690 |
|---|
| End bp | 60001 |
|---|
| Gene Length | 312 bp |
|---|
| Protein Length | 103 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637689362 |
|---|
| Product | conjugal transfer protein TrbD |
|---|
| Protein accession | YP_293659 |
|---|
| Protein GI | 72384306 |
|---|
| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG5268] Type IV secretory pathway, TrbD component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.00000000136548 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCTCTGC GCGCGATCCC CATCCGTAGG GCCGGCAACC GAGAAAACCT GTTCATGGGC
GGGGATCGTG AGCTGGTGAT GTTCTCGGGC CTGCTGGCCG GCGCGCTGAT TTTCAGCGCC
CAAGAAGTGA GGGCAACGGT GTTCGGCATC GCCTTGTGGT TCGGCGCGCT CTTCGCGCTG
CGCCTCATGG CGAAGGCCGA TCCGAAGCTG CGACACGTGT ACCTGCGGCA CCGCCGGTAC
AAGCCGTACT ACCCGGCTCG CAGCACGCCC TTCCGTGACA ACACGCCGAG TCAAGGGAAG
CAATACAAAT GA
|
|---|
| Protein sequence | MALRAIPIRR AGNRENLFMG GDRELVMFSG LLAGALIFSA QEVRATVFGI ALWFGALFAL
RLMAKADPKL RHVYLRHRRY KPYYPARSTP FRDNTPSQGK QYK
|
|---|
| |