Gene Reut_D6469 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagReut_D6469 
Symbol 
ID3607893 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia eutropha JMP134 
KingdomBacteria 
Replicon accessionNC_007337 
Strand
Start bp25286 
End bp26668 
Gene Length1383 bp 
Protein Length460 aa 
Translation table11 
GC content65% 
IMG OID637689327 
Productbenzoate transport 
Protein accessionYP_293624 
Protein GI72384271 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID[TIGR00895] benzoate transport 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACACCA CCATCGACAT CACCGACGTC ATCGAGAAGC AGTCGCCGAA CCGCACGGTC 
GGCACGCTGC TCGTCCTGTC GTTCCTGATC ATGCTGTGCG ACGGCTACGA TCTGCAGGCG
ATCGCGTTCG CGTCGCCCAC GATCATTGCC AGCTGGGGCA TCGAGAAAGC GTCCTTCGGC
TTCATCTTCA GCGCCGGACT GCTGGGCGTG ATGCTCGGCG GCTTCCTGTT CGGGTATCTG
GCGGACCGGA TCGGCCGTCG TCCCGCGCTT CTGCTCGGCA CTTTCATCTT CAGCGCGTTC
ACGCTGGCTG CGGTGCTGGC GACCAACGTC ACCGAGCTGG CCGCACTCCG CTTCTTTGCG
GGACTGGGCA TCGGCGGCAT CACCCCGATA TGCTTCGCGC TCAACGTCGA GTACGTGCCC
AAGCGCTTCC ACGCCAGCGT CGTCGGCGTC GTGATGATCG GCTACGTCAT CGGGATCAGC
GTCGGTGGTC TCTTCGCGGC CTGGCTCGTG CCTGTCTTCG GCTGGCAGGT CCTGTTCTAC
ATCGGTGGAT TGGCGCCGCT GGTGCTGCTG CCGATTCTGG CCATCGCGCT GCCGGAGTCC
ATCAAGTACC TGGTGCTTGC GGGCCGAGGC GGCGACACGA TCGCGCGGAT CGTCAATGCC
ATCGACCCTT CCGCGCAGGC GAACGCCCAG ACCCGGTTCG TTCTCGAGGC CGAAGAAGCC
CGAGCCAAGG TGGGCGGGTG GAAAGAGTCG GTGAAAGCGC TCTTTCGCGG CCGCCTGTCC
AGGATCACGC CGGTCCTCTG GCTTGCGTTT ATCGCCAACT CCGTCACGGT CTTTTTCCTG
GCGAGTTGGA TACCGGTCCT CACGGTCGGA ACCGGCAGGC CCGCCACCCT GGCCGCGATC
GGCCTGACGC TCTTCTCGGC GGGCGGCGCA TTCGGCGGCC TGTTCGCCAG CCGGCTCATC
GACAGGTTCG GGGTCGGTGC GATGGGCGCG GTTCCGCTGG TCGCGGCGGT CTTCGTCGTC
GCGGTCGGAT CGATGGCGTT CTCCGACACG GGTTTTCTGT CGATGCTCTT CATCGTCGGC
TTCTTCGTAC TCGGCGGCCA TGTCGGCCTG ATGGGGTCCA TGGGCCTGTT CTACGCCAAT
GCCAATCGGG CCAACGGCGT GGGCTGGGCG ATATCCATCG GCAAGCTCGG ATCGATCATC
GGCCCGGCCA TCGCCGGCAT CCTGATCGCG GCCAACGCCT CGATCGGCAC GCTCTTCATG
GCTGCCGCCG CGCCGCTGCT GATTGCCGGT GCCGGTGTCG TTCTGCTCGG CCGGCTTCAG
AAGGCTTCGG ACCTCGCGCA CGCGACCACC GCAGGGCATG TTGCCGATCC CCTTGTCAGT
TAG
 
Protein sequence
MNTTIDITDV IEKQSPNRTV GTLLVLSFLI MLCDGYDLQA IAFASPTIIA SWGIEKASFG 
FIFSAGLLGV MLGGFLFGYL ADRIGRRPAL LLGTFIFSAF TLAAVLATNV TELAALRFFA
GLGIGGITPI CFALNVEYVP KRFHASVVGV VMIGYVIGIS VGGLFAAWLV PVFGWQVLFY
IGGLAPLVLL PILAIALPES IKYLVLAGRG GDTIARIVNA IDPSAQANAQ TRFVLEAEEA
RAKVGGWKES VKALFRGRLS RITPVLWLAF IANSVTVFFL ASWIPVLTVG TGRPATLAAI
GLTLFSAGGA FGGLFASRLI DRFGVGAMGA VPLVAAVFVV AVGSMAFSDT GFLSMLFIVG
FFVLGGHVGL MGSMGLFYAN ANRANGVGWA ISIGKLGSII GPAIAGILIA ANASIGTLFM
AAAAPLLIAG AGVVLLGRLQ KASDLAHATT AGHVADPLVS