Gene Reut_D6456 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagReut_D6456 
Symbol 
ID3607947 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia eutropha JMP134 
KingdomBacteria 
Replicon accessionNC_007337 
Strand
Start bp10464 
End bp12155 
Gene Length1692 bp 
Protein Length563 aa 
Translation table11 
GC content65% 
IMG OID637689316 
Productphage integrase 
Protein accessionYP_293613 
Protein GI72384260 
COG category[L] Replication, recombination and repair 
COG ID[COG4973] Site-specific recombinase XerC 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAACGC GCCCCACGAG CCCGTCCGCC GCCGACATCC CGACCGACTT TCCTGATGCT 
GATGCACTGG CAGCGCTGCG TGCCTGGTAC GAGGGCGCAT CCTCGCGTGA GGCGGCACAC
CGGTACATGC AAGATCGGCT CAGCCACAGC CAGTCAGCCC GCGGCGTCAT CGGCCAGATC
CGCCGGCAAC TGGCACTTTA TGCCCGTAAC CGACAGCGGG CAGATCTGGC CACGCTGTTC
GAATGCCCGG CCCAAAAGCG TATGCATCAT GCGCGCGCCA CCACGCAGGC TGTCGAGCTA
CTGCGCATCA TGCCTGCGCC AGCTCCGCAG ATCGGCGACG ACATTGCGCA CTGGCTGCCG
AATCGCGCTG CCCGCACCCT GCACGCGGCC GGCATCCGGA CCCTGGCCGA TCTCACGGTA
CGGATTCCGC GTCGCCGGCA GTGGTGGACC GTCATTCCGG GTCTCGGGCC GGCCAGTGCA
AGAAGGATCG AGGCCTTCTT TGCCGCGTAC CCGGCGCTCA CGGAGCGGGC CCGCGCACTG
ATCATCGCGG ATCGGCAGTC AGTCGTGACG CCTTGGGAGC AACTACGGCT ACCGCACGAG
ATCGACGGAT CCGCCGGCGC CTTCCGCGCA CCGGTGTCGG CCTGCATCCT CGGCGTCGAC
AACGATTACG ACGCTATCCA GGCATGGCTC GCGTTGCACG AATCCCCGGC CACGCAGCGG
GCCTACCGCA AGGAAGCCGA ACGGCTGATT CTCTGGGGCA TCGTTGCTCG CGGCAAGGCG
CTGTCTTCGC TGACCACCCG GGATGCCACC GACTACAGGG CGTTTCTGCG CAGACCTACA
CCGCGAGAAC GCTGGGTCGG GCCACCGCGG CCGCGCACAT CAACGGACTG GCGCCCGTTT
GTCGACAACC TCTCGGCCCG TTCGATTGCG CATGCGCTTG CCGTGCTCAG CGCCATGTTC
CGCTGGCTGG TCGAGCAGCG CTACGTCGTG GCCAACCCAT TCTCCGGCAT CAAGGTACGC
GGCAGCAAGC GCGCCATGGC TCTTGAAACC TCGCACGCTT TCACCGAAGG AGAATGGATG
CTGACGCGCA CCATCGCCAA CGGGCTCGAG TGGTCGTACG GCTGGCAGGC GCCCGCTGCG
CAACGGTTGC GGTTCATGCT GGATTTCGGC TACGCAACGG GACTGCGGAT CAGCGAACTG
GCTGACGCCA CACTGCGCAG CATCGAAGTC GACGCAGCCG GTGATCACTG GCTGCACGTG
GTCGGCAAGG GCGGCAAGCC AGCCCGCGTT ACCCTGACAC CCCTAGCGCG CACAGCGCTG
GACCGATATC TGCAGGAGCG GGGGCTTCCT GTCAGCCGTG CTCACTGGAA TCCGACCACG
TCCCTGATTG GCAGCCTTGA CGACGCCGAT GCCGGCATCA AGCCCTTGCG GCTGTGGGAA
GTCATGCGCC GGTTTTTTCG GCTCGTCGCG CAGATTATCA AGAACGACCA TCCGGTGCTG
GCTGAAAAGC TGCATCGGGC CTCTCCGCAC TGGATGCGGC ACACCCATGC GACCCACGCG
ATCGCCAGAG GGGTTGAGCT GAGCGCCGTA CGAGATAACC TGCGTCACGC GTCGATTTCG
ACCACGTCGA TTTACTTGCA TACCGACGAT GTAAAGCGGG CACGGCAGTT CGGGCAGGCA
TTTACCGACT GA
 
Protein sequence
MKTRPTSPSA ADIPTDFPDA DALAALRAWY EGASSREAAH RYMQDRLSHS QSARGVIGQI 
RRQLALYARN RQRADLATLF ECPAQKRMHH ARATTQAVEL LRIMPAPAPQ IGDDIAHWLP
NRAARTLHAA GIRTLADLTV RIPRRRQWWT VIPGLGPASA RRIEAFFAAY PALTERARAL
IIADRQSVVT PWEQLRLPHE IDGSAGAFRA PVSACILGVD NDYDAIQAWL ALHESPATQR
AYRKEAERLI LWGIVARGKA LSSLTTRDAT DYRAFLRRPT PRERWVGPPR PRTSTDWRPF
VDNLSARSIA HALAVLSAMF RWLVEQRYVV ANPFSGIKVR GSKRAMALET SHAFTEGEWM
LTRTIANGLE WSYGWQAPAA QRLRFMLDFG YATGLRISEL ADATLRSIEV DAAGDHWLHV
VGKGGKPARV TLTPLARTAL DRYLQERGLP VSRAHWNPTT SLIGSLDDAD AGIKPLRLWE
VMRRFFRLVA QIIKNDHPVL AEKLHRASPH WMRHTHATHA IARGVELSAV RDNLRHASIS
TTSIYLHTDD VKRARQFGQA FTD