| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Reut_C6430 |
|---|
| Symbol | |
|---|
| ID | 3607621 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia eutropha JMP134 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007336 |
|---|
| Strand | + |
|---|
| Start bp | 623313 |
|---|
| End bp | 624203 |
|---|
| Gene Length | 891 bp |
|---|
| Protein Length | 296 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 637689291 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_293588 |
|---|
| Protein GI | 72384234 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.00632877 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATATAG TGATGGACCT TCGCCACCTG CGGTACTTCA TCGCCATCGC TGAGGAACTT
AATTTCACGA GAGCGGCCGA GCGACTGCAC ATCGCCCAGC CTCCGCTGAG CATGCAGATC
CGCCAACTCG AGGAGGAGAT GGATGTCACA CTGCTAAATC GCACGCGTCG GCATGTGGAG
TTGACGGAAG CGGGTCGCAT TTTCCTTGAG CAAGCGCGGC AGATCCTGCG AGCTACCGAG
AGGGCAGTCG TGCAGGCGCA ACGCGCGCAT CGCGGCGAGA CGGGTCGGCT GACCGTCGGC
TTCTTCGAAC ACACGTCCTA CACGCTGCTG CCGCCCATCC TGCGCGCCTA CCGAGAACGT
TTTCCTTCCG TCGAAATCCT GCTGCGCTGG TTTCCGGTCG TCAAACAGGC GGAAGCTCTG
CGCCGGGGTG ACGCGGATAT TTCCTTCATG CGGCCGGTGC CGGACCTTGA GGAAGTGACA
TGGGAGACCA TCCTGGAAGA GCCGTTCGTG CTGGCCGTGC CGGCAAGACA CCCGTTGGCG
AACGCTGAGT CGATTTCTCT GAAGAAATGC GCGCAGGAGC CCTTCGTGAT GTACATACCG
GAGATGGCGC CGGACTTCCA CGCCATGAAC ATGCGCATGT GCGCGTCGGC GGGTTTTGTA
CCGAAGGTCA TCTCGGAAGT GGGGCAGGTC TATACGCTAC TCGGCCTGGT CAGCTCCGGT
GCGGGCATCG GCTTCGTGCC AGCGTCAGTC CGGAAGGTGA AGTTCGACCA CGTGGTTTAC
AAGCCGATCG AAGGCCGGCA GCCGACAATC GAGATCATGC TCGGCTATAG CCAGCGCACC
CCAACGCCGC TCATGACGGC GTTCATCGAG ACGGCCAAAA GCATGCTGTG A
|
|---|
| Protein sequence | MDIVMDLRHL RYFIAIAEEL NFTRAAERLH IAQPPLSMQI RQLEEEMDVT LLNRTRRHVE
LTEAGRIFLE QARQILRATE RAVVQAQRAH RGETGRLTVG FFEHTSYTLL PPILRAYRER
FPSVEILLRW FPVVKQAEAL RRGDADISFM RPVPDLEEVT WETILEEPFV LAVPARHPLA
NAESISLKKC AQEPFVMYIP EMAPDFHAMN MRMCASAGFV PKVISEVGQV YTLLGLVSSG
AGIGFVPASV RKVKFDHVVY KPIEGRQPTI EIMLGYSQRT PTPLMTAFIE TAKSML
|
|---|
| |