| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Reut_C6401 |
|---|
| Symbol | |
|---|
| ID | 3607631 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia eutropha JMP134 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007336 |
|---|
| Strand | + |
|---|
| Start bp | 588982 |
|---|
| End bp | 590463 |
|---|
| Gene Length | 1482 bp |
|---|
| Protein Length | 493 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637689262 |
|---|
| Product | twin-arginine translocation pathway signal |
|---|
| Protein accession | YP_293559 |
|---|
| Protein GI | 72384205 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1231] Monoamine oxidase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCAGAGA AATCTCCCTC AGACTCAGCC AACCTGCCGC GCAGGCAATG GCTTAAATGC
GCCGGCGTTG CAGCCGCCGC AGGCGGATTG GGCCTTGGTA TCCGCCAGGC CAATGCCGGT
ACCGCCAAGG CCGAACAGAA GACGGACGGC GTTGTTGACG TTGCCATCAT CGGCGCGGGG
TTGGCGGGCT TGACGGCTGC GCGCGACCTG CAACTGGCTG GTTGTGACTC CTTCGTGGTC
TTGGAAGCGC GAGACCGGGT AGGCGGGCGG ACGCTCAATT ACAACATCGA GGGTGGCTAT
GTCTCCGAAG TCGGCGGCCA GTGGATCGGT CCCGGTCAGA CCGCCGTGGC GGATCTTGCC
CGCCAACTGG AGGTCGGTAC GTTCCCGAGC TACTACGAAG GAAAGACGGT GGTACTGGGC
GGCGACGGCC GGATGGAGCT CGATCTAAAA GGGACGTTTG GTACGGACGA GGCGGTCAGC
GGAAAGCTCA GCAAGCTGTC GCGGGAGGTG CCTTCCGGCG CCCCTTGGAA ATCTGCGAAA
GTCGGTGAGT TGGACAAGCT CTCGATCGGT GACTGGCTGG CCAAACAGAA CATCAAGCCC
GAAGATCAAG TCGGGTGGAA CGCCAGCAGC ACTCTTTCCG GCGGCACAGC GCCGGCGAAG
ATGGGGCTCT TGCATTTCCT TTCGATGATC AATTCGGCGG ACTGCGACTA TTCGCAGCTC
GACAGCATCA AGCACAGCGC CCAGGAAACC CGCTTCGTTG GCGGGTCGCA AATTCTGAGC
ATCAAGATGG CGAAGCAACT GGGCGACAAG GTGCGCCTGT CGACGCCGGT GCGCCAGATT
GCCGGCTGGG ATCGTGATGT CGTCACGCTG CAGACCGACC ACGGCGAGGT GCGTGCCCGA
AAAGTCATCA TGGCCATTCA TCCGGCCCTG TGTAACCAGG TGCAGTTCAA CCCGCCACTG
CCGGAAAAGC GCGCAGCTTT GCAGCGTGCA TGGCCTGCGC ATTCGCCCGC ACGCAAGACC
GCCATGGTCT ACCGCCGGCC GTTCTGGCGT GACAAGGGTC TGAATGGACA CATCTTCCAG
GCCAATGGGC CGTTGATCTG GGCCTTCGAC AACTCCCCGC CGGGTGGAGA AATCGGAATC
ATCAACGCCT TCGTTGTGAA TGCACAGCTT CCGTCGGATC CTCGGGCAGC TAAAGCCATA
CAGACCGAAC TCTACGCCCG GGCATGGGGC CGCGAAGCCC TGTCGCCGGT GGCCTATCAC
GATCAGGACT GGGGCCAGGC AGACCCCTGG ACCATCACAT GCGTCTCTGC CATTCCTCCC
GGCTTTTGGA GTACGCATGG TGAGGCACTA CGCCCGCCGT GCGGCAACCT GATCTGGTCG
GGCACCGAGA CCGCAGAGAT TTGGGCCGGC TACATGGATG GCGCGGTGCG CTCGGGCCAT
CAGGCCTCTC TCCACGTGCT CAATGCACTG CGTCGAGCAT AA
|
|---|
| Protein sequence | MAEKSPSDSA NLPRRQWLKC AGVAAAAGGL GLGIRQANAG TAKAEQKTDG VVDVAIIGAG
LAGLTAARDL QLAGCDSFVV LEARDRVGGR TLNYNIEGGY VSEVGGQWIG PGQTAVADLA
RQLEVGTFPS YYEGKTVVLG GDGRMELDLK GTFGTDEAVS GKLSKLSREV PSGAPWKSAK
VGELDKLSIG DWLAKQNIKP EDQVGWNASS TLSGGTAPAK MGLLHFLSMI NSADCDYSQL
DSIKHSAQET RFVGGSQILS IKMAKQLGDK VRLSTPVRQI AGWDRDVVTL QTDHGEVRAR
KVIMAIHPAL CNQVQFNPPL PEKRAALQRA WPAHSPARKT AMVYRRPFWR DKGLNGHIFQ
ANGPLIWAFD NSPPGGEIGI INAFVVNAQL PSDPRAAKAI QTELYARAWG REALSPVAYH
DQDWGQADPW TITCVSAIPP GFWSTHGEAL RPPCGNLIWS GTETAEIWAG YMDGAVRSGH
QASLHVLNAL RRA
|
|---|
| |