| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Reut_C6289 |
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| Symbol | |
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| ID | 3607760 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia eutropha JMP134 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007336 |
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| Strand | - |
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| Start bp | 459837 |
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| End bp | 463067 |
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| Gene Length | 3231 bp |
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| Protein Length | 1076 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637689152 |
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| Product | hydrophobe/amphiphile efflux-1 HAE1 |
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| Protein accession | YP_293449 |
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| Protein GI | 72384095 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.72315 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATCTTG GTAGTCCATC CGCCTCTGGA CTTTCCGATG GCTTGGGGTC CGTTTCAAAG
TTCTTCATTT ACCGACCGAA GTTTGCCTGG GTCGTAGCCA TCTTCATTCT CTTGGCTGGT
CTGTTGGCTA TCCCCAACTT GCCCATCGCA CAGTTCCCGA ATGTAGCCCC ACCGCAGATC
TTGATCACGG CCAACTATCC TGGTGCCTCG GCTCAGACGA TCACGGATAC GGTGACTTCC
GTTATTGAGG AGGAATTGGC CAGCGCCAAG CACTTGCTCT ATTTCTCCTC GAACAACTCC
AACAATGTGG TGGAGATAAC GGTTACGTTC GAGCCGGGCA CAGAACCTGA TTTGGCACAA
GTGGATGTCC AAAATAGACT AAAAAACGCT GAATCCCGGC TGCCGGATTC GGTGCGACAG
CTCGGCCTGG TCGTGGAACA GGCGAACGCT GGCTTCCTGA TGTTCTATGG GCTGACCTTC
AAAGACAATG ATCCGTCGCG AAGCACTGTA GAACTCGCAG ACTACGCGGT CCGAAACATC
AACAAGGAAA TTCGTCGGAT ACCGGGCGTG GGCAAGCTGC AGTTTTATAG CTCCGACCCA
TCAATGCGCG TATGGCTTGA CCCTCAGAAG ATGGTTGGGT ACGGAGTTTC GGTTGACCAA
GTCAATCAGG CTATTCGCAA TCAGAATGTC CAAATTCCCG CTGGTGCCTT TGGCGCCCGG
CCTAGCAATG CCGGCCAGGA ACTGACCGCC TCGCTACTGA TTCAGGGCAT GAAGCGCGAT
CCGAAGGAGT TCGGGAACAT TATCGTCCGC GCCAATCCCG ACGGCTCGAC TGTGCGTCTG
TCTGACCTGG GGCGCACCGA AGTCGATCTG CAGAGTTTCG CCTACGAATC TCGGGTGAAC
GGGCGGCCAG CGGTGACCGG TGCAATTCAG TTGGCCCCAG GTGCCAACTC GCTGGAAACC
TCCGCTGCCA TCAAAGCGAA GATGGAGGAA CTGAGCAAGT CCTTCCCTGA GCACATCAGC
TACGTTCTGG CATATGACAC TTCGCTGTTC GTAAAAGTTG CAATGAAAAA GGTCTTGGCG
ACCTTGCTTG AAGCAGTGGT CCTGGTGTTT CTCGTGATAC TGCTGTTCCT GCAGAACGTT
CGATATACCC TGGTTCCTAC CATCGTCGTC CCGGTGTGTT TGCTCGGCAC TTTCGCCGTG
ATGTACGCGA TTGGCTTTTC GATCAACATG ATGACCATGT TCGGCATGGT CTTGGCTATC
GGCATTTTGG TGGACGATGC CATTGTGGTC GTGGAGAACG TGGAACGCAT CATGGCTGAG
GAAGGGCTAT CGCCTGTCGA TGCGACGGTC AAGGCCATGA GTCAAGTGGC CGGAGCGATC
GTAGGCATCA CTCTCGTTCT CACGGCAATA TTCCTTCCGC TGGCTTTCAT GTCGGGCTCC
GTAGGGATCA TCTATAAGCA GTTCGCCATT TCCCTGGCAG TATCCATCCT ATTCTCTGGC
TTCCTCGCGC TGACGCTGAC TCCGGCGCTC TGCGCAACGA TGCTAAAGCC GCTCCCTATC
GGCCACCATC ATGAGAAAAA GGGCTACTTC GGTTGGTTCA ATCGGATTTT CTCCGGGCTG
ACAAACCGCT TCGACTGGCT GAATCGCAAG CTGATCAAAC GCGCAGGCCG TGGCATGTTG
GTCTATGCCG CGCTCGTCGT CATTTTGGGT GTGGCCTACG TGCGAGTACC GGAGGCCTTC
GTGCCGCAGG AAGACCAGGG CTACAACCTT GTGGACATCC TGCTGCCGCC GGGAGCGTCC
TATGCGCGTT CGGAAAAGGT CACGGCCGAA GTGGAGAAGT ATCTGTCCAG TCGCGATGCC
GTGGATCAGG TCATTAGTCT GGTTGGCTGG AGCTATTCCG GTACCGGTGA GAACACCGCA
ACGATCTTCC CTTCCTTCAA GCATTGGACG GAGCGAAGCG CCGAGCAGTC CGTCGACCAG
GAAACCAATG CACTGAACGA GGCGTTCGCT AATGGCAACG CTGGCCGGGT TCTCGGGATC
AATCCACCCC CGATTGAAGG TCTTGGCAAT GCCGGTGGTT TCGCTCTCAG GCTTCAGGAT
CGCGGGGGCA TCGGATATGA GGCCTTGAGC AAGGCTAAGG ATCAACTGCT TGAGCAAGCA
GCGAAGTCTC CGAAGATTGC ATACGCCATG GTTGAGGGCC TGCCCGACGC GCCACAGCTA
GTGGTGACGG TTGATCGGTC CAAGGCCGAA GCGATGGGCG TTCGATTCGA TGCCATTCGC
AACACGGTGG CCACAGCCTT CGGCTCGGAG ATCGTGGGTG ACTACGTCAA CAATGGCAGG
TTGCAGAGGG TGGTGGTCCA GTCGCAGGCC GCCCGCAGGA CCAATCCCGG CGAGATCCTA
GAGCTTAATG TCGGCAATGA GAACGGCGAG CTGGTGCCGC TGAGTTCGTT CGCCACGGTT
GGATGGCAGC GCGGTCCGGC ACAAGTAACC CGCTACAACG GCTACTTGGC CTTCTCGATC
AACGGTGACG CAGCGCCGGG CTATACCAGT GGTGAAGCGA TGGCTGAGAT CGAGAAGTTG
GCAAGTCGAC TGCCTTCCGG CGTCGGTTAT GAGTGGACGG GCCTTTCTTA CCAGCAACGC
CAAGCCGGCT CCCAGGTGCC GATCCTGTTC TCGCTGGCCA TCCTCGCGGT CTTCCTGCTT
CTCGTCGCCC TGTATGAGAG TTGGTCCATT CCGCTGTCGG TCATGCTGGT CGTGCCGATT
GGAGCTCTGG GTTCCGTTCT GGCAGTAATG TTGGTGAACT TGCTGCCTGG CGCGACAACG
ATGGCAAATG ATGTGTACTT CAAGGTTGGA TTGGTCACCA TCGTGGGCCT CGCAGCAAAG
AACGCCATCT TGATCGTGGA GTTCGCCAAG ACCTTGGTAG CAGACGGCAG AAGCGTTCGA
GAAGCCGCCA TTGAAGCTGC ACGATTGCGC TTTCGGCCGA TCGTCATGAC TTCAATGGCA
TTCATCCTCG GCGTGGTCCC GCTTGTAGTC GCAACCGGCG CCGGCGCTGC GAGCCAAAGC
TCGCTCGGTA CCGGGGTGAT CGGCGGCACG ATCGCAGCCA CCGTCCTGGG TGTCGTGTTC
GTTCCAATCT TTGTTGATTT CGTTATGAGG CTGGCTGCAA AACTCTCAGC GAAGAGCAAC
GCATCCGCGC CTGTTCTGAC GCAGATAGAG ATGAAGGGAG ACACCAAGTG A
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| Protein sequence | MNLGSPSASG LSDGLGSVSK FFIYRPKFAW VVAIFILLAG LLAIPNLPIA QFPNVAPPQI
LITANYPGAS AQTITDTVTS VIEEELASAK HLLYFSSNNS NNVVEITVTF EPGTEPDLAQ
VDVQNRLKNA ESRLPDSVRQ LGLVVEQANA GFLMFYGLTF KDNDPSRSTV ELADYAVRNI
NKEIRRIPGV GKLQFYSSDP SMRVWLDPQK MVGYGVSVDQ VNQAIRNQNV QIPAGAFGAR
PSNAGQELTA SLLIQGMKRD PKEFGNIIVR ANPDGSTVRL SDLGRTEVDL QSFAYESRVN
GRPAVTGAIQ LAPGANSLET SAAIKAKMEE LSKSFPEHIS YVLAYDTSLF VKVAMKKVLA
TLLEAVVLVF LVILLFLQNV RYTLVPTIVV PVCLLGTFAV MYAIGFSINM MTMFGMVLAI
GILVDDAIVV VENVERIMAE EGLSPVDATV KAMSQVAGAI VGITLVLTAI FLPLAFMSGS
VGIIYKQFAI SLAVSILFSG FLALTLTPAL CATMLKPLPI GHHHEKKGYF GWFNRIFSGL
TNRFDWLNRK LIKRAGRGML VYAALVVILG VAYVRVPEAF VPQEDQGYNL VDILLPPGAS
YARSEKVTAE VEKYLSSRDA VDQVISLVGW SYSGTGENTA TIFPSFKHWT ERSAEQSVDQ
ETNALNEAFA NGNAGRVLGI NPPPIEGLGN AGGFALRLQD RGGIGYEALS KAKDQLLEQA
AKSPKIAYAM VEGLPDAPQL VVTVDRSKAE AMGVRFDAIR NTVATAFGSE IVGDYVNNGR
LQRVVVQSQA ARRTNPGEIL ELNVGNENGE LVPLSSFATV GWQRGPAQVT RYNGYLAFSI
NGDAAPGYTS GEAMAEIEKL ASRLPSGVGY EWTGLSYQQR QAGSQVPILF SLAILAVFLL
LVALYESWSI PLSVMLVVPI GALGSVLAVM LVNLLPGATT MANDVYFKVG LVTIVGLAAK
NAILIVEFAK TLVADGRSVR EAAIEAARLR FRPIVMTSMA FILGVVPLVV ATGAGAASQS
SLGTGVIGGT IAATVLGVVF VPIFVDFVMR LAAKLSAKSN ASAPVLTQIE MKGDTK
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