| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Reut_C6256 |
|---|
| Symbol | |
|---|
| ID | 3607805 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia eutropha JMP134 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007336 |
|---|
| Strand | + |
|---|
| Start bp | 423131 |
|---|
| End bp | 424351 |
|---|
| Gene Length | 1221 bp |
|---|
| Protein Length | 406 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637689122 |
|---|
| Product | L-carnitine dehydratase/bile acid-inducible protein F |
|---|
| Protein accession | YP_293419 |
|---|
| Protein GI | 72384065 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1804] Predicted acyl-CoA transferases/carnitine dehydratase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.326861 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCCCAT CGAAAAGTTT GCGTGGGCCG CTGGCCGGTT TGCGCGTCGT TGAACTCGCT
CACGTCATGG CCGGGCCGGT CGGAGGGCTG CTGCTCGCCG ACATGGGTGC CGACGTCGTA
AAGGTCGAAA AGCTGCCCGG AGGCGACGAT ACGCGACGCA CGACGCCGCC AGAGATTGAA
GGTGAATCGG CCTCGTACAT GATCCTCAAT CGCAACAAAC GCGGGATCGC CGTCGATTTG
AAAAGCGAGC GCGGTCGGGA ACTTGTGAGC CGCCTCGTTG CTCAGGCGGA TATCGTTGTG
GAGAACTACC GGCCCGGCAC CATGGAGAAG CTGGGGTTGG GCTATGACGT GCTGGGCCGG
CTTAATCCTG GCTTGGTCTA CTGCAAGATC ACTGGCTTCG GACTGACTGG TCCTTATGCG
CAGCGCGCTG GTTATGACCT GATCTCGCAA GGCATGTCTG GCCTGATGGG ACTAACCGGA
GAGGGACCGG GCCGTCCCCC GGTCAAGGTC GGCGTTCCTG TGGGCGACGT CACTGCCGGC
ATTCTGGCTG CCACCGGCGT GCTGGCTGCC TACATCGAGC GGTTGCGTAC CGGACAGGGG
CAATACGTTG ATACATCACT GCTCGAAGCC TCGCTGGTGC ATACATACTG GCCCGTGGCA
TTGGCGTTCG CTACCGGAAA GGCGGCAGGG CCAATGGGAT CCGCGCATCC GGTCGCGGCG
CCGTATCAGG CTTTTCCCAC CGCAGATGGA TGGCTGAACA TTGGTGCAAT GAGCCAGGCT
ACCTGGGCGG GCGTTTGCGA AGTCCTCGGT ATGAGTTGGA TGCTTACAGA TGAACGCTTT
GCCACAAATG GCGCGCGCAT GGCCAACCGT GGCGCGTTGG TGACCCAAAT GAGCGAAGTC
CTGGTCACGC GCTCGACGGA TGCGTGGGTG ACGGCGTTCG AGCGTGCGGG GGTACCTGCG
GGTCCGGTCA AGAACATGGT GCAGGTGCTG GAGGATCCGC AGACGCGTGC GCGAGACATG
GTGATCAAGG TGGAGCATCC GGTGGCGGGC CAGATAGAGG CGCTGGGTTG CCCCATCAAG
TTCTCGCATG GCAATGGCGT GACGCGTCGC GGTGCGCCAC TTTATGGCCA GCACACAGCC
GAGGTCATGG CCGAACTTGG ATACTCGGAT AGCGAGATTG CGGAGCTAGC GCATGGCGCC
GTCGTTCACG TCGCTAGATA A
|
|---|
| Protein sequence | MTPSKSLRGP LAGLRVVELA HVMAGPVGGL LLADMGADVV KVEKLPGGDD TRRTTPPEIE
GESASYMILN RNKRGIAVDL KSERGRELVS RLVAQADIVV ENYRPGTMEK LGLGYDVLGR
LNPGLVYCKI TGFGLTGPYA QRAGYDLISQ GMSGLMGLTG EGPGRPPVKV GVPVGDVTAG
ILAATGVLAA YIERLRTGQG QYVDTSLLEA SLVHTYWPVA LAFATGKAAG PMGSAHPVAA
PYQAFPTADG WLNIGAMSQA TWAGVCEVLG MSWMLTDERF ATNGARMANR GALVTQMSEV
LVTRSTDAWV TAFERAGVPA GPVKNMVQVL EDPQTRARDM VIKVEHPVAG QIEALGCPIK
FSHGNGVTRR GAPLYGQHTA EVMAELGYSD SEIAELAHGA VVHVAR
|
|---|
| |