Gene Reut_C6252 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagReut_C6252 
Symbol 
ID3607801 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia eutropha JMP134 
KingdomBacteria 
Replicon accessionNC_007336 
Strand
Start bp419322 
End bp420383 
Gene Length1062 bp 
Protein Length353 aa 
Translation table11 
GC content63% 
IMG OID637689118 
Productporin 
Protein accessionYP_293415 
Protein GI72384061 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3203] Outer membrane protein (porin) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGGTTGA AATCTGGAAC TGCCGCGGCG GCAGTCGCGA CGGTCCTGAT GTCGGGCAGC 
GCCCAGGCCC AGGTGGCGTC CGGCGTTACG CTGTACGGCC TGGTCGACAC TGGCATCGAG
TATCTCAGTC ATGCGGGCAG CGACGGCACG GGCGCGCAGT ATCGCATGTC ACCCGGCAAC
GTCACTGGCT CACGATGGGG CTTGCGTGGT CGAGAGGACC TGGGTGGCGG CCTGAGTGCC
GTGTTCGTGC TGGAAAGCGG TGTCAATAGC GATACCGGGA CTTCAGGCCA AGGAGGCAGA
CTGTTCGGGC GGCAAGCGTA CGTTGGCCTG CAGGGCAACT GGGGCATGGT GACGCTCGGC
AGGCAGATCA ATACGTTGTA TGAGATGTTT GTGCCCTTCG ATCCCGTGCG CTATACAAGC
TACGGCTTGC TTGCCCAGGA TGCCCAGTTT GCCAACCGCG CCGACAATGC CATCAAGTAC
ACCGGCAACT TTGGCAACCT GACCGTGATT GGCCTCTACA GCGCAGGCTA CGACGCGACC
ATCGCCAACG GCAGCGAGGT CCCGGGCAAT CCCCGGGTCG GCCAGGAGAT CGGAGCCGGT
GTTTCGTACA CGATCGGCAA TCTTGGCATG GTGCTCGACT ACGACCAGCG CCGGGGCACC
ACGGCGTCCA CCGCGCCGAA TATCGAGCGA CGCTATGCCA CCGGCCTGCT GTGGACATCC
GGCCCGTTCA CCGCCACAGT GGGATATCGC TTCCTGCAAG GCACGATTGC CGCGCCGTCG
CTGCGCGCGC ATCTGTACTG GCTGGGTGGT TCCTACAACT TCACCCCGGC CTTCGTACTT
CGCGCCGGTG TCTATCGGAC CGATGTGCGC GATTCCCCTA ACGATGCGAT GAGCTATGCG
TTGGCCGCTG CCTACAGTCT TTCCAAGCGC ACCGATCTTT ACCTGAACGC CTCGTTCATG
GATAACAAGG GTGCATCGCG GCTCGGCGTG GTGAATGGCG GCACGGTTGC ACCGGGCGTC
AACCAGACCG GCGTTGTCGC GGGTATCAAG CACATCTTCT GA
 
Protein sequence
MRLKSGTAAA AVATVLMSGS AQAQVASGVT LYGLVDTGIE YLSHAGSDGT GAQYRMSPGN 
VTGSRWGLRG REDLGGGLSA VFVLESGVNS DTGTSGQGGR LFGRQAYVGL QGNWGMVTLG
RQINTLYEMF VPFDPVRYTS YGLLAQDAQF ANRADNAIKY TGNFGNLTVI GLYSAGYDAT
IANGSEVPGN PRVGQEIGAG VSYTIGNLGM VLDYDQRRGT TASTAPNIER RYATGLLWTS
GPFTATVGYR FLQGTIAAPS LRAHLYWLGG SYNFTPAFVL RAGVYRTDVR DSPNDAMSYA
LAAAYSLSKR TDLYLNASFM DNKGASRLGV VNGGTVAPGV NQTGVVAGIK HIF