Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Reut_C6223 |
Symbol | |
ID | 3607850 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia eutropha JMP134 |
Kingdom | Bacteria |
Replicon accession | NC_007336 |
Strand | - |
Start bp | 385843 |
End bp | 387915 |
Gene Length | 2073 bp |
Protein Length | 690 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637689092 |
Product | 5-oxoprolinase (ATP-hydrolyzing) |
Protein accession | YP_293389 |
Protein GI | 72384035 |
COG category | [E] Amino acid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0145] N-methylhydantoinase A/acetone carboxylase, beta subunit |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.220681 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCGTTTTG CAGTAGACAC GGGCGGTACC TTCACCGACC TCATCGTTGA AGATGAAGTC GGGAATTTGC ATATGTTTAA GTCTCCGACG ACTCCGTCGG ACCCCATCAG CGGAGTCCTG GATGCCCTGC AGGTTGCGGC CGATGGTCTC GGGCTTTCGC GCGATACCAT GCTGGCGCGC GGCGAGATGT TCATCTACGG GACCACGCAT GCGATCAACG CCATCATCAC TGGCAATACC GCTCGTACCG CGCTGCTAGT GCCCTCTGGT CACCGCGATA TCTTGACTTT GCGCGAGGGT GGTCGCCTGG AGCCGTTCAA CTTCACGGTG GCGTATCCCG ATCCGTTTGT GCCGAGGGCG CTTACTTGGG AGGTCCCCGG CCGCATCCTG GCTGACGGCA CCGAGTTGGA GCCGCTGGAC GAGGCCGCGC TCACCCGGTC CCTCGATGAA ATGCGACATG CAGGCATCGA AGCCGTTGCG GTATGCCTGC TATGGTCGAT CGTGAATCCT GCGCACGAGC TTCGTGTCGC CGAGCTTATC CAAGCCCACC TTCCCGGCGT GCCCTTCACG CTATCGCACC TACTCAACCC GATTCCCCGG GAATTCCGCC GCGCTTCGTC CAGCTGCATC GATGCTTCTC TCAAGCCGAT GATGCGTGCC TATATGCATA CGCTGGTGGA CCGACTCAAA TCAGCGGGCT TCCCGGGACG CGTCGTGGTG GTCACCTCAC AAGGCGGAGT CATGGATGCG GACCACGTCG CGGACGCGCC AATCCATCTC ATCAATTCCG GTCCTTCTAT GGCCCCAATT TCCGGTCGCT ATTTTGCGCA AACCGACGAG GACACGGGAA CGGCAATCGT GGCCGACACT GGTGGCACGA CCTACGATGT CAGCCTGGTG CGTCGGGGCA GAGTGCCATG GTCCCAGGAA ACCTGGATCG GCGCCCCCTA TCGCGGCGTC ATGACGGGAT TCCCCTCGGT GGACGTAAAG AGCGTGGGCG CAGGCGGTGG CTCCATCGCC TGGGTAGACG GTGGCGGCAT GCTGCACGTC GGCCCCAGCA GTGCCGGCGC CGTGCCGGGG CCTGTTTGCT ATGGCCGAGG CGGCACGTTG CCGACTGTCA CGGACGCCTC GCTCGCGTTG GGTTATATCG ACCCCGACTT CTTCCTCGGC GGCACCATGA GACTGGACGC GGTTGCTGCA CGTGAGGCAA TCCAGACCCA TATCGCTACG CCCCTGGGCA TGTCAGTGGA AGCTGCTGCA GCCTCCATCA TCAGCATTGC CACCGAGAAC ATGGTGCAGG CCATCTGCGA CATCACCATC AACCAGGGTA TCGACCCAAG CGAGGCCGTC CTCATCGGCG GCGGTGGTGC AGCTGGACTG AATTCCGTAC TGATTGCGCG GCGCCTGAGC TCACCGCGCC TGGTCATTCC GCAAGTCGGT GCCACCATGA GCGCTGCCGG CGCCATGATG TCCGACCTGA CCTCTCATTA CCACGCCACC TTCTTCACGC GAAGCGACGC CTTTGACTTC GCTGGCGTGC GGGAAGTGCT GAACGACCTC ACCAGTCGTT GTCAGGAGTT TATCGATGGC CCGGGCAAGG GCTCTCTCGC TCAGACCGTA ACACTCTGGG CAGAGGCTCG CTATCCGGAG CAGGTATGGG AGCTTGAGGT TCAGTTGCCT CCGCATGGCA TACATACGGA GACGGACATT GCCGCGCTGG TCGAAGGCTT TCACCGGGCC CACGAGGAAG TCTTTGCTAT CCGCGACGCG GGTTCGCCCA TTGAGATCGT GGGCTGGCGG GCGACGGTTG CCTGTCGCAT CCGCGCGCAG GAGGGCGGCA CGCTTGCCAA CTCGATCGCA CGCCCGATCG CAAACCCCGT TCGCAAAGCC TATTTCGAAG GCTCAGGCTA TGTTGACACC GCGGTGGTCC GCTTCGAAGC ACTCGATTCC TCGGAAACCG TCCGCGGCCC GGCAATCATC GAGTCGTCAT TTACCACTGT CGTGTTGAAC CCCGGGGCGA GCGCCACGCG TCGGGCCAGC GGCAGTCTTT CTATTCTTCC CGGCCGCGAT TAA
|
Protein sequence | MRFAVDTGGT FTDLIVEDEV GNLHMFKSPT TPSDPISGVL DALQVAADGL GLSRDTMLAR GEMFIYGTTH AINAIITGNT ARTALLVPSG HRDILTLREG GRLEPFNFTV AYPDPFVPRA LTWEVPGRIL ADGTELEPLD EAALTRSLDE MRHAGIEAVA VCLLWSIVNP AHELRVAELI QAHLPGVPFT LSHLLNPIPR EFRRASSSCI DASLKPMMRA YMHTLVDRLK SAGFPGRVVV VTSQGGVMDA DHVADAPIHL INSGPSMAPI SGRYFAQTDE DTGTAIVADT GGTTYDVSLV RRGRVPWSQE TWIGAPYRGV MTGFPSVDVK SVGAGGGSIA WVDGGGMLHV GPSSAGAVPG PVCYGRGGTL PTVTDASLAL GYIDPDFFLG GTMRLDAVAA REAIQTHIAT PLGMSVEAAA ASIISIATEN MVQAICDITI NQGIDPSEAV LIGGGGAAGL NSVLIARRLS SPRLVIPQVG ATMSAAGAMM SDLTSHYHAT FFTRSDAFDF AGVREVLNDL TSRCQEFIDG PGKGSLAQTV TLWAEARYPE QVWELEVQLP PHGIHTETDI AALVEGFHRA HEEVFAIRDA GSPIEIVGWR ATVACRIRAQ EGGTLANSIA RPIANPVRKA YFEGSGYVDT AVVRFEALDS SETVRGPAII ESSFTTVVLN PGASATRRAS GSLSILPGRD
|
| |